Lepeophtheirus salmonis (salmon louse): 121116531
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Entry
121116531 CDS
T08214
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-B
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121116531
04121 Ubiquitin system [BR:
lsm04121
]
121116531
Enzymes [BR:
lsm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121116531
Membrane trafficking [BR:
lsm04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121116531
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121116531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-Nse
zf-ANAPC11
zf-RING_10
Zn_ribbon_8
zf-C3HC4_3
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
121116531
NCBI-ProteinID:
XP_071743596
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All DBs
Position
4:7767657..7770857
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AA seq
371 aa
AA seq
DB search
MSAEGVSETLRSINYYFCHHCSTHFTLNSIPNDDTTAVCPRCHMGFIEELPDPPPASTLN
SPQDFLETINGMILLRFLRPFESNVHSILPSLPTPNFLLTFNINLLFLAERPSRGSQDAP
LAFIGFPNFMQGLTNILSNFDGARGQQIHLIQPNPGMTMHSNPGDYVFGGGGIDAIVTQI
LNQPLDGVGPPPLDKELIKEIPTVKISREQVGSSLQCAVCWEDFVLDEPVRELKCDHFFH
EQCIIPWLELHGTCPVCRKFQQEEQNKEDGSITNNETSSGDNTENTWAPWTNATDLNDVI
TSAIETVFRSVEYTTSPLSASQPPSSSVSTSSTGGNSSSSNGSGETSSGTNERGTSNSDI
SNLDYYDFDLE
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgaaggggttagtgaaacattaagatccataaattactacttttgtcatcat
tgttctacacactttactttgaactccattccaaacgacgatacgacggctgtgtgtccg
agatgtcatatgggattcatagaagagcttccagatcctcctcctgcctccacgcttaat
tctccgcaggattttttagagactattaacggtatgattttacttagattcttacgacca
tttgaaagtaatgtacatagtatcttgccttcacttcccactccaaatttcttacttaca
ttcaatattaatttgttgtttttagctgagagaccttccaggggaagtcaagatgctcct
ttggcctttattgggtttccaaattttatgcagggcctcactaacatcctttccaatttt
gatggggctcgtggtcaacaaattcatctcatccagccaaatcctggaatgactatgcac
tccaatccaggggattacgtttttggtggaggtggaatcgacgccattgtcacacaaatt
ttaaatcaacctttggacggggttggtcctccacctttagacaaagaactaataaaagaa
atacccacagttaaaattagccgtgaacaagttggttcaagccttcaatgtgccgtttgc
tgggaggattttgttctagacgaacctgttcgagagctaaaatgtgatcacttttttcac
gaacaatgtattataccttggttagagcttcatggtacttgtcctgtttgtcgtaaattt
caacaggaggagcagaataaagaagatggtagcatcactaacaatgaaacttcttccggt
gataatacggaaaacacttgggctccctggacaaatgcaaccgatcttaatgatgtcatt
acatctgcaattgaaacagtctttaggagtgttgagtataccacatcccccctctctgca
tctcagccaccatcatcatcagtcagtactagcagtactggaggaaactcttcatcatcc
aatggttctggagaaacaagttcgggtacgaatgaacggggaacatccaattccgatatt
agtaatttggattattacgattttgatttggagtaa
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integrated database retrieval system
