Lepeophtheirus salmonis (salmon louse): 121116584
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Entry
121116584 CDS
T08214
Name
(RefSeq) zinc phosphodiesterase ELAC protein 2 isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsm03016
]
121116584
Enzymes [BR:
lsm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
121116584
Transfer RNA biogenesis [BR:
lsm03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
121116584
Prokaryotic type
121116584
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
121116584
NCBI-ProteinID:
XP_071743849
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Position
4:25516080..25521010
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AA seq
619 aa
AA seq
DB search
MRFRIIKDGKFPSLLLGGNSHYKKTTNFLINPVEGMSCKLRHHPYIQHFLLTQKSWIPSF
AGLPGILTDVLKTKRLKFNNEIFIHGPPGMNNIFKVLKYVLIIEEDTCLYGIEPRGCEEI
VRFKLNQNWRFDDKYERHKVTQFFEEEGIRIQYFPLASNTESFPSKIQYPAWNSLSINYK
DEIFYPHDVPRNNIVSSYLISDSNSQVLILDIPDITYLDSLWETIPSIEANTVFDFSPHE
VKETERYKKWYNSALPRMTNIISLQDYNYPKEDKRNDLKKLRNVYPADVIQYHDTEPSYH
KNTNDDQVSYPKLTFLGTGSKRIGNSRNVSGILLRVSPQSCGLLDCGENTYHRLTEAFGI
EETNKILKSLRFIFISHRHNDHHLGLFTIIQERDKLYDGNAPKLYLIAPRSFKNLLKHYH
GLFEDLVTSVFHINTMRLIKDSDKFLISHLYAKFLKDTEMDFCEILIAEHIKNSYSINLS
AKGWKVLYTGDTKPNSRYRNKAPDVLIHEATLPSYLGTIAHKQLHSSTQDAIDAYKSSNA
GFLVLTHFSEAFDALPHLEEVMISDNIALAFDFLSVEPESLKNIAISEERFKNLSNTFKT
EVFISNERKKRWDLKNEML
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttcggataatcaaagatggaaaatttccctcactgttgcttggaggaaattct
cactataaaaaaacaactaatttccttatcaaccccgtggaagggatgagttgcaaactc
cgacatcatccatatattcaacattttctcttaactcaaaagtcatggataccttctttt
gctggactgccagggattttgacggatgtgcttaagacgaaaagattaaaatttaataac
gaaatttttattcatgggcctcctggtatgaataatatattcaaagtgttgaaatatgta
ttaataattgaagaggatacgtgtttgtatggcattgaaccaagaggttgtgaggaaata
gtgcgttttaaacttaatcagaattggagatttgatgataaatatgaaagacataaagta
acccaatttttcgaagaagaaggaatcaggattcaatattttccccttgcgtcaaatact
gagtctttcccctcaaaaattcaatatcctgcctggaatagtctgtccattaattacaaa
gatgaaatcttttatcctcacgatgttccacgaaacaatattgtttcttcttatttaata
tctgattctaactcgcaagttttgattcttgatataccagatattacgtacttagattcg
ctttgggaaacaattccttcaattgaagctaatacagtttttgatttttcacctcatgag
gttaaggagaccgaaagatacaaaaaatggtataattctgccttacccagaatgactaat
ataatcagcctccaagactataattatccaaaagaagataagagaaatgacttgaaaaag
ttgagaaatgtctatcccgcggatgttattcagtaccacgacactgagccttcttatcat
aaaaatactaatgatgatcaagtatcttatccgaaattaacatttctgggaactggctcc
aagcgtattggtaacagtcggaatgtcagtggaattcttcttagagtttctccacagtcc
tgtggactactcgattgtggagaaaatacgtatcatcggttgactgaggcatttggaatt
gaggaaacaaacaagattttaaagtcgttaaggttcattttcatatctcatagacacaat
gatcatcatttgggattattcaccattatccaagaaagggataaattgtatgatggaaat
gctcctaaattatatttaattgctcctagaagcttcaaaaacttgctcaaacattatcac
ggtctgtttgaagacctggtaacttccgtttttcatataaatactatgagacttatcaaa
gattcggataagtttttaataagtcatttgtatgcaaagtttttaaaagatacagagatg
gacttttgtgagatattaattgctgaacatatcaagaactcttattctattaatttatca
gcaaagggatggaaggttctatacacaggagatactaaaccaaactctcgatatcgaaat
aaagcgcctgatgttctcatacatgaagccacactcccttcctatctaggaactattgct
cacaagcaacttcattcgagcacacaagatgccatagatgcttataagagttcgaatgct
ggctttctcgtcttaactcacttctccgaagcttttgatgcattacctcatctagaagaa
gttatgataagcgataacattgctcttgcctttgatttcttatcagtggaaccggagagc
ttgaaaaacattgcaatttcggaagaacggtttaaaaacttgtcaaatacctttaaaaca
gaagtcttcatctccaatgaaagaaaaaaaagatgggatctcaagaatgaaatgttgtaa
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