Lepeophtheirus salmonis (salmon louse): 121116621
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Entry
121116621 CDS
T08214
Symbol
Nipped-B
Name
(RefSeq) LOW QUALITY PROTEIN: nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121116621 (Nipped-B)
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
121116621 (Nipped-B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
Cnd1
Cnd3
SCD
Motif
Other DBs
NCBI-GeneID:
121116621
NCBI-ProteinID:
XP_071744091
LinkDB
All DBs
Position
4:complement(45642008..45649524)
Genome browser
AA seq
1790 aa
AA seq
DB search
MLKKAKIEEEIDVDDTKFCISKFVPQKKTRTFEETAPTSIKVDTDEIMESNLYQRFNKTV
ELIFDNMEEINLQDLDASQDDLELPPEILIQKYQLQDLASETARLKNLGAMDSVPPERLV
KLLTILEINIRDGARVCPIPSEDEEEDILWQELANERVNRAADASLTALHILTSRNMNKR
VYIDDVIERLAIFLRFQLSNTIYPSYDPVYKEISKKNYTYLGSMKRIRNSAHVVRDKNIL
GLYNKVLEMITMLADLVKIQLLTDTTVLHISTVAVAPFFVEGIPQLQLSALKLVTNLFSK
YEKHRKLMLDDILSSIARLPSSKRNLRSYRLNSSNHIQMLTALVLQLIQCVVVLPKKTCT
HYREKXETRADHAKNSDNSNIDDDFDSSMDRDVLIENRYEMAMATAHQFLTVFLMKCGSK
NEEIDYRPIFENFVQDLLTTVNTPEWPAAELLLSFLGHVLRDKFKNRSTELSLRLSSLDY
LGVVAARLRRDAVQSKLKVDIIDSIINIIKKEEEKDDSSGESLDSMSNELVHEDPEEIRV
SFLRRVLLNYLAVQGGDDDQAIMNARTFYICQWYRDINAEGKKPKPSPVKKKKKKRSSES
SGEDEESDVSEPEPVEEDETDTKKSELYRQKVKRKDFLVEKILPFGINEKTKVLSTHIDP
PSAHLIVKYLSSKRPFFNSFDSYLQDIINVLFEQSTQVRTRALKCMALIVQEDPNVLLRA
DMQKWVHYSFTDSSTMVREAAVDLVGKFILHKRDLIEQYYPMISQRILDTGVSVRKRVIK
ILKDICLQFPDYNMIPEICGKMIRRINDEEGIRKLVMEVFQNMWFQPIKERNRTPEEEKL
LITRAQNITDVVVACRDTGLEWFEQLLQTLFKPPQDKEDVTKKVVEAPKHLVLACQQIVD
CIIESVLQMEEGQNNEDSLNTSGSPSPSNRIVACLNTLYLFAKIRPTLLVEHVQILQPYL
SITCKTKNDYLTIVHVARTMELVVPLIKHPSEVFLSQLEEDSVKLVIEHNIPACVSCLGS
IVNNVTKNYGLIRDCFVKYCNKMSIYRRAHENDPLDLRLKKSMPIFLRGLFTVGLFLRHF
DFSNPDIYTGLTGGKDTVDEVFETMFYFMRHESTDIQTATLQALGNLCVRHFNFMLTTKL
KNLYVDILKEDFYDTKHKVVILNNLENYLCEEENRMISQDKHWLENCKKENLKEMRDVTS
GMASTVIQVYLKYILNSVIHPALEARRAALRVIGLVLAQGLVNPVQIVPYLICMSTDPAT
AVSHTADRELQDIGKKYPTFIYTKLFQGIKLSHKLQMTIRKDGEVVRGFREKEGEVPTAL
HGFMYSIMKTTKVQRRALLNNLLKQFDDYSNETSLAQRLYLADNLAYIPYTVVDEPLFVI
HHIQIMVSVIGSNMLQSFKESLKYPTDCETKMNPETGKYEHLYDEDLDDDFNSVLSRLPD
DPSVSLDCIRSSQGCMLLLVLKDHLKEFYGITESRISQYSPTDISKVNERQVNRRSNVRF
NPKATIEIIAKGDVNRELTEDNKKEIVKKYFQFKDLMNRIDRDDEEDDESKNPNNSLTST
SRYSNHNKPITPTSTPTKGSKRDHDEFVPPMDYPHQQETIAQNSQGTSDRQTRTSSSSTS
SHRSSSSTRSNASNNNDSSRKVLDPQTGEMVPYSNFSNDDPTSSDNNEKKSNPVPKITIN
LGQRLSSTSSSSSRDRHRQSSSSSNSSSSHRSHRHHSSSSHHQTPHRQSSSSSHKHHKKK
KNERNAQMKIPLTLIILKEPQNQAKLNIRDTFITYFYKTLFVCFSPSLFL
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaaaggccaaaattgaggaagagatagatgttgatgacacgaaattctgcata
tctaaatttgtacctcagaaaaagactcgtacttttgaggaaaccgctccaacctcaatc
aaagtagacactgacgaaatcatggagtcaaatctttatcaaagattcaataagactgtg
gaactcatatttgataatatggaagaaatcaatctccaggatttagatgcgtcccaggat
gacttggaattgcctccagaaattctcattcaaaagtatcaacttcaggatcttgcctcc
gaaaccgctcgactcaaaaaccttggagcaatggactctgttccgcctgagcgtttagtt
aaactcttaactatccttgaaatcaatattcgtgatggtgctcgagtgtgtccaatacct
tcagaggatgaagaagaggatattctttggcaagagcttgccaatgaacgggttaatcgg
gctgcagatgcttctttgacggctttgcatatccttacatcgaggaacatgaacaaacgt
gtttatattgatgatgtgattgaaagattagccattttccttcgttttcaactctctaac
acgatatacccatcttatgatccagtgtataaagaaataagtaaaaagaactatacttat
ctgggatccatgaagaggatacgaaatagtgctcatgttgttagagataaaaacatcctc
ggactctataataaggttcttgaaatgataaccatgttggcagaccttgttaaaatacaa
ctcttaacagacaccactgtccttcatataagtacagtcgcagttgcgcctttctttgtt
gaaggaattcctcaattacaactctcagcacttaagctcgtcacaaatcttttttcaaag
tatgaaaagcatagaaaacttatgctggatgacatcttgtcttctatagctcgattacct
tcatccaagaggaatcttcgatcctacagacttaactcctctaatcacattcaaatgctc
actgcactcgttcttcaacttattcagtgcgtcgttgttctccccaaaaaaacttgcact
cactaccgagaaaaataagaaactcgtgccgatcatgcgaaaaatagtgataatagtaat
attgacgatgactttgattcgtccatggaccgtgatgtactcattgaaaatcgttatgaa
atggccatggcaacggctcatcaatttttaacggtgtttcttatgaaatgtggatctaaa
aatgaggaaatcgattacaggcctatttttgaaaactttgttcaagatttactcaccact
gtgaacacaccagagtggcctgctgccgagcttcttctctcatttttaggacatgtattg
agagataagttcaaaaatcggtccacagaactgtcactgaggttatcctctttggattac
ttaggtgtagttgcagcaagactacgaagagacgcagttcaaagtaaattaaaagttgac
ataattgattccatcattaatatcatcaagaaagaagaggagaaggatgactcaagtgga
gaaagtctcgactctatgtccaacgaattagttcatgaggatcccgaagagatacgagta
tcatttttaagacgagtactcttgaattacttggcagttcagggcggagacgatgatcaa
gcaatcatgaatgcaaggactttttatatatgccaatggtacagggatatcaatgccgag
ggtaaaaagcctaaaccaagtcctgttaaaaagaagaaaaagaaaagatcctcggagtct
agtggcgaagacgaagaatcggacgtttcagaacctgagcccgttgaggaggatgaaaca
gatacgaaaaagtctgaattatacaggcaaaaagtaaagcgaaaggattttcttgtggaa
aagattttacccttcggaatcaatgagaaaaccaaagttttatctactcacatagatccc
ccttctgcacatttgatagtcaaatatttgagttccaaaaggccttttttcaattccttt
gatagctatcttcaggatattattaatgtactctttgaacagtccacacaagttcgtaca
agagctctaaagtgtatggcactcattgtacaagaggatccaaatgttcttctacgtgcg
gatatgcaaaagtgggtacattacagctttacggactcttcaaccatggtgcgagaggca
gcagttgatttagttggaaagtttatcctccataaaagagatttgattgagcagtattat
ccaatgatttcacaaaggattcttgatacgggtgtaagtgttcgaaaaagggtaattaaa
attctcaaggatatttgccttcaattccccgattataatatgatacctgagatttgtgga
aaaatgattagaaggataaacgacgaggaaggtattcgtaaacttgtcatggaggtattc
cagaatatgtggttccaacccatcaaagaaagaaatagaactccggaagaggaaaagtta
cttatcactcgagctcagaatattacggatgttgtagtggcttgcagggatacgggtctg
gaatggtttgaacaacttttgcaaactctttttaaacctccccaagataaggaagacgta
acaaagaaagttgttgaagccccaaagcatttagttttggcttgtcaacaaatcgtagat
tgtatcattgaaagtgtacttcagatggaagagggtcaaaataacgaggattctttgaat
actagtggtagtccaagcccttctaatcgtattgttgcatgcctcaacacactatattta
tttgctaaaataagaccaactcttcttgttgagcatgttcaaatccttcagccctatctt
tctatcacatgcaagaccaaaaatgattacctaactattgtacatgtagctcgaaccatg
gaactcgttgttccccttattaaacatccgtccgaagtttttctatcccaattggaagag
gactctgttaaattagtcattgagcacaacattcccgcttgtgtatcttgtcttggctct
atagtaaataatgtgacaaaaaactatgggcttattcgagattgttttgtgaaatactgc
aataaaatgtccatttatcgaagagcacatgagaatgatccgttagatctacggctcaag
aagtctatgcccatatttctgaggggactttttacagttggcctattccttaggcacttt
gatttctctaaccctgatatttatactggtttaacgggcggaaaagatacggtggatgaa
gtcttcgagaccatgttttatttcatgaggcacgaatcaactgatattcaaactgctact
ctacaagcgttaggaaatttgtgtgttaggcattttaattttatgttgacgacaaagctt
aaaaatctatatgtagacattctcaaggaggatttttatgatactaagcataaagtagtg
attttgaacaatcttgaaaattatttatgcgaagaagaaaatcgaatgattagtcaagat
aaacattggcttgagaattgtaagaaagaaaatttaaaagaaatgcgtgatgtaacttca
ggaatggcttctactgtgattcaagtctatttaaaatatatattaaactctgtaattcat
cctgctttagaagccagaagagctgctctgagagttattggattagttttagctcaaggc
cttgtcaatccagttcaaattgtaccctacctcatatgtatgtcaacggatcctgctacc
gctgtgtctcatacggcagatagggaacttcaggatattggtaaaaagtatcccaccttc
atttataccaagttgttccaaggaatcaaattatcgcataaacttcaaatgaccattcgt
aaagatggagaagtggttagaggatttcgagaaaaagaaggagaggttcctactgcactc
cacggtttcatgtactcaattatgaaaacgaccaaagtgcagcgaagagcacttttgaac
aatctcctgaaacaatttgacgactattcaaatgaaacatcattagcgcagcgtttgtac
ctggccgataacttggcatatattccttatacagtcgttgatgaacctctctttgtgata
catcatattcaaatcatggtctccgttattggatccaacatgcttcaatccttcaaggag
tcactgaagtatccaacggattgtgaaacgaaaatgaatccagagactggaaaatatgaa
catttatatgacgaagatttagatgatgattttaattctgttttatcaaggctaccagat
gatcctagtgtttcgttggactgtattcgatcttctcaaggatgtatgttgttgcttgtt
ctgaaagatcatcttaaagaattctacggaataactgaatcaagaatcagtcaatattct
ccgactgacatatccaaagtaaatgagcgacaagttaatcgcagatccaatgttcgattc
aatccaaaagccactatagaaatcattgccaaaggagatgttaatcgtgaattaactgag
gacaacaaaaaagaaatagttaaaaaatactttcaattcaaagatctaatgaatcgtatt
gaccgtgacgatgaagaagatgacgagagcaagaatccaaacaattcattgacttctaca
tccagatattctaatcacaacaaaccaataacacccacttctactcctactaaaggaagt
aaaagagatcatgatgaatttgtaccccctatggactatccgcatcaacaagaaactatt
gctcaaaactcccagggtacttcggatcgacaaacacgaacgagttcatcatctacttcg
tcacatcgttcatcctcaagtactcgatccaacgcatcaaacaacaatgattcgtcacga
aaagtactagaccctcaaaccggtgaaatggttccctatagtaacttttctaatgatgac
cctacgtcaagtgataataatgagaagaagtctaaccctgttcccaaaataaccattaat
ttgggacaacgcctctcctcaacctcctcttcaagtagtcgagatcgtcatcgacaaagc
agcagttcaagtaacagcagtagtagtcaccgatcacatagacatcattcatcttcttct
catcatcaaacaccacatagacagtcatcttcctcatcgcataaacaccacaaaaagaaa
aaaaacgaaagaaatgctcagatgaagattcctctgactctgattattcttaaagaacca
caaaaccaagccaaactgaatattcgcgacacattcatcacttatttttataagactttg
tttgtttgtttttctccttctttgtttctttaa
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integrated database retrieval system
