Lepeophtheirus salmonis (salmon louse): 121116630
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Entry
121116630 CDS
T08214
Name
(RefSeq) zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsm03041
]
121116630
Spliceosome [BR:
lsm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121116630
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Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
121116630
NCBI-ProteinID:
XP_040566827
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Position
4:<51039374..51045879
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AA seq
923 aa
AA seq
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PCHVPWSRSSGCSQLWLSCSRRCTRRWRRSPSASYWRPSTCSTSTAATSRGLLRLSNSPR
TGTCSRRSCCCRCPPTTYGTTLYPAAAAGAAATYQYPYYTPTTYTPDPHYQARPVYSRPN
TPVPRYASYTSNTPTTSTPAAAYSYPPSIVAAAKPNIYVQPASTPATLNIAAVAKVPPNW
PPQQQRKTVTASQLARGAPTITGRPFKPRLPPKPQQLHYCEVCKISCAGPQTYKEHLEGQ
KHKKKEAAAAAGSSSSNNLGKNNGGGSRGGNALRCELCDVTCTGSDAYAAHIRGAKHQKV
VKLHTKLGKPIPSVDPVVVTKGDTSTSLIGPRQTPSSALPPTNKISFKQPSVPKITFVGS
NQAKIESKQLDMNVSNMVSSTNGSKNVTINTEEVTIPRLPEEKDVQPVGHDYIEEIRNDD
GKVISFNCKLCDCRFNDPNAKEMHMKGRRHRLQYKKKVNPDLVVDVKPSIRQKKLAEERA
KRTTQAREEFWRRREEEFKLMEEAERLYWEEQRRFEEEQMDYYEWYRGRSSNSSPAPSTA
GSNNSSQEGNYSHKSQQQRFGPPPPFGFPPMLRRPDSNDDRHVIAKHGEIYPGEDELNAI
QRVVTTTEKVLKMISDFMAKEEEAKKHPSVEGNTEGASSGTRILKGVMKVGILAKGLVLK
GDTQVRLVVLCGEKPTTELLDKIINYFPNYAEEISPNESYTIKSEPNEAGFVILTQIKEI
EASVHITLTSPAMRDDSSPHPDNVLNPEKCLEALAALRHAKWFQARAAGRQSCVMIIRVL
RDLCQRVPTWSPLNLFPLELMVEKVLASAGVPLSPGDAFRRIFEAVANGLLLPDSPGFLD
PCEKEPQDAAKDLSPQQREDITASAQHALRLIAFRQIHKVLGIDPLPPPKYTRGRANRKR
RREDEESSDIGKKDKKETEAVAA
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
ccctgccacgtaccctggagtcgtagcagcggctgcagccaattatggttatcgtgctcc
cggaggtgcaccaggaggtggcgcaggagcccctcagcctcctactggcgcccctcaacc
tgctcaacctcaacagcagcaacaagtcgtggcttactccgcctatccaacagccccagg
acaggcacctgcagccgccgcagctgctgctgcaggtgccccccgacaacgtatgggaca
acactttacccagcagctgcggcgggcgctgcagccacttaccagtatccctactatact
cctacaacctacacaccggatccacattatcaggccagacccgtttatagccgccccaat
actccagttccccgatatgcatcctacacctccaataccccaaccacgagcactccagct
gctgcatacagttatccaccctccattgtggcggctgccaagcccaatatctatgtacaa
cctgcatctactcctgctactttaaatatcgccgcagtggccaaagtaccgccgaattgg
cctcctcagcaacaaaggaagacagtgactgcctctcaacttgctcgtggtgctccaaca
attacaggaaggccctttaaacctcgtcttcctcctaaaccacaacaattacattattgt
gaagtgtgtaaaatcagttgtgccggaccacaaacctataaggaacatttggaagggcaa
aaacacaaaaagaaggaggctgctgcagctgcgggcagctcctcttctaacaatctaggt
aaaaataatggtgggggtagtcgtggaggaaatgcgctcagatgtgagctctgcgatgtg
acttgtacgggatcggatgcatatgccgcccatattcgtggagcaaagcatcaaaaagta
gtcaaattacacacaaaattagggaagcctattccatctgtagaccctgttgttgtcacc
aaaggtgacacttcaacatcactgattggtcctcgtcaaactccatcttctgcgctaccc
ccaactaataaaattagttttaagcaacccagtgttcccaagatcacatttgttggatcc
aatcaagcaaagatagagagcaaacagttagatatgaatgtgtcgaatatggtatcctct
accaatggctcaaagaatgtaacgatcaatactgaagaggttactatacctcgtttaccc
gaggagaaggatgttcaacctgtaggtcatgactatattgaagaaataagaaatgatgat
ggaaaagtgatttcctttaattgcaagctctgcgattgtcggttcaacgatcccaacgct
aaagaaatgcatatgaaaggaaggagacatcgactgcagtacaagaaaaaagtaaacccg
gatttggtagttgatgtcaagcctagtattcgtcaaaagaagttagcagaggagcgagct
aaaagaactactcaggctagagaagaattttggagacgtagagaagaagagtttaagtta
atggaggaggctgagagattgtattgggaggaacaacgacgttttgaggaagaacaaatg
gattattatgaatggtatcgtggtagatcatccaactctagcccggctccctctactgca
ggatcaaacaattcttcgcaagagggaaattacagtcacaagtctcaacaacaaaggttt
ggaccacctccaccttttggtttcccccctatgttacgcagacctgattctaacgatgat
cgtcatgtaattgccaaacatggagaaatatatcctggagaagatgaattgaatgccatt
caacgtgttgtaacaaccactgaaaaagttttaaaaatgataagtgattttatggctaag
gaagaggaggccaagaagcatccctcagtggaaggaaatactgaaggagcttccagtgga
actagaatcctgaaaggtgtcatgaaagttggaattttggctaaaggcctcgttcttaaa
ggggatactcaagttcgactagttgtactttgtggggaaaagccaaccacggagttgctt
gataaaataataaactatttccctaactacgccgaagaaatatcccccaatgagtcatat
acaattaagtcagagccgaatgaggccggttttgttatactgactcaaatcaaagaaatt
gaagcatctgttcacataactcttacatcccctgcaatgagagatgactcttcgcctcat
ccagataatgtattgaatccagagaagtgtctagaggctcttgcagcacttcgacatgca
aaatggtttcaagcaagggctgcaggccgacaatcttgtgttatgatcatccgagtttta
agggatctatgccaaagggttccaacgtggagtccacttaatttattcccccttgagtta
atggtagaaaaagtattggcatccgctggggttcctctttcccctggagatgcatttaga
cgcatttttgaagcagttgcaaatggtttacttcttcctgactctccaggatttttagat
ccttgtgaaaaagaacctcaagatgcagcaaaagatctatctcctcaacaaagagaggat
atcacagcaagtgctcaacatgccctgcgattgatagcattcaggcagatacataaggtt
ctaggaattgatccactaccaccacctaaatatactcggggacgagcaaataggaagaga
cggagagaagatgaagaatcctcagatattggcaagaaagataaaaaagaaactgaagca
gttgctgcctag
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