Lepeophtheirus salmonis (salmon louse): 121116630
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Entry
121116630 CDS
T08214
Name
(RefSeq) zinc finger RNA-binding protein-like
KO
K13203
zinc finger RNA-binding protein
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsm03041
]
121116630
Spliceosome [BR:
lsm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121116630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
121116630
NCBI-ProteinID:
XP_040566827
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Position
4:51388362..51393895
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AA seq
922 aa
AA seq
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CHVPWSRSSGCSQLWLSCSRRCTRRWRRSPSASYWRPSTCSTSTAATSRGLLRLSNSPRT
GTCSRRSCCCRCPPTTYGTTLYPAAAAGAAATYQYPYYTPTTYTPDPHYQARPVYSRPNT
PVPRYASYTSNTPTTSTPAAAYSYPPSIVAAAKPNIYVQPASTPATLNIAAVAKVPPNWP
PQQQRKTVTASQLARGAPTITGRPFKPRLPPKPQQLHYCEVCKISCAGPQTYKEHLEGQK
HKKKEAAAAAGSSSSNNLGKNNGGGSRGGNALRCELCDVTCTGSDAYAAHIRGAKHQKVV
KLHTKLGKPIPSVDPVVVTKGDTSTSLIGPRQTPSSALPPTNKISFKQPSVPKITFVGSN
QAKIESKQLDMNVSNMVSSTNGSKNVTINTEEVTIPRLPEEKDVQPVGHDYIEEIRNDDG
KVISFNCKLCDCRFNDPNAKEMHMKGRRHRLQYKKKVNPDLVVDVKPSIRQKKLAEERAK
RTTQAREEFWRRREEEFKLMEEAERLYWEEQRRFEEEQMDYYEWYRGRSSNSSPAPSTAG
SNNSSQEGNYSHKSQQQRFGPPPPFGFPPMLRRPDSNDDRHVIAKHGEIYPGEDELNAIQ
RVVTTTEKVLKMISDFMAKEEEAKKHPSVEGNTEGASSGTRILKGVMKVGILAKGLVLKG
DTQVRLVVLCGEKPTTELLDKIINYFPNYAEEISPNESYTIKSEPNEAGFVILTQIKEIE
ASVHITLTSPAMRDDSSPHPDNVLNPEKCLEALAALRHAKWFQARAAGRQSCVMIIRVLR
DLCQRVPTWSPLNLFPLELMVEKVLASAGVPLSPGDAFRRIFEAVANGLLLPDSPGFLDP
CEKEPQDAAKDLSPQQREDITASAQHALRLIAFRQIHKVLGIDPLPPPKYTRGRANRKRR
REDEESSDIGKKDKKETEAVAA
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
tgccacgtaccctggagtcgtagcagcggctgcagccaattatggttatcgtgctcccgg
aggtgcaccaggaggtggcgcaggagcccctcagcctcctactggcgcccctcaacctgc
tcaacctcaacagcagcaacaagtcgtggcttactccgcctatccaacagccccaggaca
ggcacctgcagccgccgcagctgctgctgcaggtgccccccgacaacgtatgggacaaca
ctttacccagcagctgcggcgggcgctgcagccacttaccagtatccctactatactcct
acaacctacacaccggatccacattatcaggccagacccgtttatagccgccccaatact
ccagttccccgatatgcatcctacacctccaataccccaaccacgagcactccagctgct
gcatacagttatccaccctccattgtggcggctgccaagcccaatatctatgtacaacct
gcatctactcctgctactttaaatatcgccgcagtggccaaagtaccgccgaattggcct
cctcagcaacaaaggaagacagtgactgcctctcaacttgctcgtggtgctccaacaatt
acaggaaggccctttaaacctcgtcttcctcctaaaccacaacaattacattattgtgaa
gtgtgtaaaatcagttgtgccggaccacaaacctataaggaacatttggaagggcaaaaa
cacaaaaagaaggaggctgctgcagctgcgggcagctcctcttctaacaatctaggtaaa
aataatggtgggggtagtcgtggaggaaatgcgctcagatgtgagctctgcgatgtgact
tgtacgggatcggatgcatatgccgcccatattcgtggagcaaagcatcaaaaagtagtc
aaattacacacaaaattagggaagcctattccatctgtagaccctgttgttgtcaccaaa
ggtgacacttcaacatcactgattggtcctcgtcaaactccatcttctgcgctaccccca
actaataaaattagttttaagcaacccagtgttcccaagatcacatttgttggatccaat
caagcaaagatagagagcaaacagttagatatgaatgtgtcgaatatggtatcctctacc
aatggctcaaagaatgtaacgatcaatactgaagaggttactatacctcgtttacccgag
gagaaggatgttcaacctgtaggtcatgactatattgaagaaataagaaatgatgatgga
aaagtgatttcctttaattgcaagctctgcgattgtcggttcaacgatcccaacgctaaa
gaaatgcatatgaaaggaaggagacatcgactgcagtacaagaaaaaagtaaacccggat
ttggtagttgatgtcaagcctagtattcgtcaaaagaagttagcagaggagcgagctaaa
agaactactcaggctagagaagaattttggagacgtagagaagaagagtttaagttaatg
gaggaggctgagagattgtattgggaggaacaacgacgttttgaggaagaacaaatggat
tattatgaatggtatcgtggtagatcatccaactctagcccggctccctctactgcagga
tcaaacaattcttcgcaagagggaaattacagtcacaagtctcaacaacaaaggtttgga
ccacctccaccttttggtttcccccctatgttacgcagacctgattctaacgatgatcgt
catgtaattgccaaacatggagaaatatatcctggagaagatgaattgaatgccattcaa
cgtgttgtaacaaccactgaaaaagttttaaaaatgataagtgattttatggctaaggaa
gaggaggccaagaagcatccctcagtggaaggaaatactgaaggagcttccagtggaact
agaatcctgaaaggtgtcatgaaagttggaattttggctaaaggcctcgttcttaaaggg
gatactcaagttcgactagttgtactttgtggggaaaagccaaccacggagttgcttgat
aaaataataaactatttccctaactacgccgaagaaatatcccccaatgagtcatataca
attaagtcagagccgaatgaggccggttttgttatactgactcaaatcaaagaaattgaa
gcatctgttcacataactcttacatcccctgcaatgagagatgactcttcgcctcatcca
gataatgtattgaatccagagaagtgtctagaggctcttgcagcacttcgacatgcaaaa
tggtttcaagcaagggctgcaggccgacaatcttgtgttatgatcatccgagttttaagg
gatctatgccaaagggttccaacgtggagtccacttaatttattcccccttgagttaatg
gtagaaaaagtattggcatccgctggggttcctctttcccctggagatgcatttagacgc
atttttgaagcagttgcaaatggtttacttcttcctgactctccaggatttttagatcct
tgtgaaaaagaacctcaagatgcagcaaaagatctatctcctcaacaaagagaggatatc
acagcaagtgctcaacatgccctgcgattgatagcattcaggcagatacataaggttcta
ggaattgatccactaccaccacctaaatatactcggggacgagcaaataggaagagacgg
agagaagatgaagaatcctcagatattggcaagaaagataaaaaagaaactgaagcagtt
gctgcctag
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