Lepeophtheirus salmonis (salmon louse): 121116689
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Entry
121116689 CDS
T08214
Name
(RefSeq) uncharacterized protein
KO
K08739
DNA mismatch repair protein MLH3
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
121116689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121116689
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
121116689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
DASH_Dad3
Motif
Other DBs
NCBI-GeneID:
121116689
NCBI-ProteinID:
XP_040566917
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All DBs
Position
1:complement(10719286..10723197)
Genome browser
AA seq
1027 aa
AA seq
DB search
MSDKRIFPLRPKVRERLHEKSSTPGSLLLMVESFIYRALAAGATRILIELDLSPSVYKLR
FMDDGKPIGYKEIPSNWIKSSRRVQISSENHCWIFREGKFEENSTRNVDNEGPMHNEMIF
SDFLYLSPVRQRILHPYRDVEEIRIQVVVPYSLLHFDVHFMLTESRTKEIVYSVKGNCKS
RKQRFISHLNYCKIPFSESHMREISQKLEVFHVIGLMSTLGIPEDKHQFLFLNGRSIQKT
KWHGYINGIVHKYSIHASASSNPCYILAIKCPENEYNIMYESKMMKVEFVRYKLLTELLK
NTILTFLSQNGIGAHLKHVQNRKGPRINASSFSMSGVTPLESTSKEDPRILAHVLKRKQD
LSQFQIADLHDGVRKGLPAQKLRVVDSVQGLNNVLDDDLLLNKFVKEDDVMSSARSADFP
DIFGVRSQSLKNTSSLHSSSSSCRSYDKNNREVASYAFLNNSMDEECSDFPLSSTLTNRI
IQNVSPMETKFSMDESNTTAASHNYSAILESTDDPSISGDRFLNIGHCSPPPFNFIELDN
FQQQPENCVEDESVENKLVDTLNVDVTGYSEDNSFCRKFRSKSSKKIYKEFLLQQMKQIQ
QKIDQLNEEESSPDHDASQELQSVETPKKVPGIVIQSQITTTQLQVDPESKSCPTEEIHA
TFRVIDQTLAYPEDSILKSSKIPYGWIKKSLTSGEDIFIHLESGFTVNSIEEISQKSNPP
HNKKLLDVVRDRGSFPENTGMDKPNIKSDQANQLIQSWKNPVIKSIEDNILSTVSKPDGG
GRTVNAVENMKFDKSVFQNLKVLYQLDNKVIVTLLNDEVVVLLDQHAVHERIRLEKLIKD
NYLDNNVSSSELTTPVAISISASISRLLLEYPYVLSRFGLKTLEISSEDILVFTHVPNCF
IYQGSNESKYNTNTPLKELIILLCNDIYQNILDLGTETKILPKTIQDVLNSQACRGAIKF
GDPLSLKECDDLIQDLQYCQTPFQCAHGRPSIAPIINLNTLKISSAYRKEQFYRVNFIKL
KYNRFVK
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataaacgaatttttcctcttcgacccaaggtaagggagcgactccatgagaaa
agttctactccaggttctttactcctcatggtggagtccttcatttatcgcgcgttagct
gcgggtgcaacacggatactcattgagttggatttgagcccttctgtttataagctgcgg
tttatggatgatggaaaacccattggctataaggaaattcccagtaattggatcaagagt
tcaagacgggtacaaatatcttcggagaatcattgctggatattccgagaagggaaattt
gaggaaaactctaccagaaatgttgacaatgaagggccaatgcataatgaaatgatattc
tccgatttcttatacttaagtcctgtacgtcaacgaattcttcatccatacagagatgtc
gaagaaattcgaatacaagtggtagttccttattcccttcttcacttcgatgttcatttt
atgttaacagagagtagaacaaaggaaattgtatattccgtcaagggaaattgtaaaagt
cgaaaacagcgatttattagtcacctcaactattgtaaaatcccattttcggaaagtcat
atgagagaaattagtcaaaagctagaagtgtttcatgtcattggacttatgtccacgtta
ggtataccagaagataagcaccagtttctctttctaaatggtcgcagtatacaaaaaaca
aaatggcatggttatatcaacggaatagtacataaatattcaatacacgcttcggcatcc
tccaatccttgttacatattagccataaaatgtcctgaaaatgaatacaatataatgtac
gagtctaaaatgatgaaagtggaatttgttcgttataaattattaactgagcttcttaaa
aataccattctaacatttttgtcacaaaatggaattggtgctcatttgaagcatgttcaa
aatcgaaagggtcctcgaatcaatgcgtcttccttttctatgagtggagtgacacccttg
gaatcaacctcaaaagaagatccaagaatccttgctcacgtattaaaaaggaaacaagac
ttgtctcaatttcaaattgcagatcttcacgatggtgttaggaagggactccccgctcaa
aagctaagagtcgttgatagtgttcaaggattaaataatgttttagatgatgatttgctt
ctaaacaaatttgttaaagaggatgatgttatgtcttccgctcgttctgcagattttccc
gacatttttggagtacgatcccaatccttgaagaatacatcatcccttcattcatcttct
tcatcttgtagatcatatgataaaaataatcgagaggtggcttcatatgcatttttaaat
aattcaatggatgaagaatgttccgattttccactctcctccaccttgaccaatagaatt
attcaaaatgtatctcctatggaaacaaagttttcaatggatgagtcgaatacaactgct
gcttctcataattactcagctatactagaatctactgatgatccctctatctcaggagat
cgtttccttaatataggacattgttctcctcctccatttaattttatagaattagataat
tttcagcaacagccagaaaactgtgtggaggatgaatcggtagagaataaattggtggat
actcttaacgttgatgtgacaggatattctgaagataattctttttgcagaaaatttaga
agtaaatcaagcaaaaagatatacaaagagttccttcttcagcaaatgaagcaaatccaa
caaaaaatcgatcaactaaatgaggaagaatcttctcctgatcatgatgcttcccaggag
cttcaatctgttgaaacacccaaaaaagttcccggtatagtcattcagtcccaaataaca
acaacacagttacaagtagatcctgaatctaaatcttgtccgacagaagaaatccatgct
acatttcgtgtcattgatcaaactttggcttatcccgaagattccattcttaagtcatcc
aaaataccttatgggtggattaagaaatctttgacgagtggcgaagatatttttattcat
ttagaatctggttttacagtaaacagcatagaggaaatatctcaaaagtcgaatccacct
cataataaaaagttattagatgttgttcgagaccgtgggagttttcctgaaaacactggt
atggataaaccaaatataaaaagtgatcaagccaatcaactaattcaatcttggaagaat
ccagttataaaaagtattgaagataatatcttatcgaccgtttccaaacctgatggtgga
ggacgaactgtcaatgccgtcgaaaatatgaaatttgataaatcagtttttcaaaattta
aaagtattgtatcaattggataacaaggttatcgttacattattaaatgatgaagtagta
gtactattggaccagcatgctgttcatgagaggattcgtttggaaaaactaataaaagat
aattatttagataataatgtttcttcatctgaactaactacacctgtggcaatttctatt
tctgcgtccatctcacgccttcttttagaatatccctatgttctttcgcgatttggatta
aagacactagaaatatcttctgaggatattttggtattcactcacgtcccaaattgtttc
atttatcaaggctcaaatgaatccaaatacaatactaacacacccctgaaagaacttatt
atcttattatgcaatgatatctaccaaaatattttggatttgggaacggaaacaaaaata
cttcctaaaaccattcaagatgtccttaattctcaagcctgtagaggagcaataaagttt
ggagatcccctatcattaaaagaatgtgatgaccttattcaggatttacaatattgtcaa
acaccttttcaatgtgcacatggtcgaccctccattgcacctattattaatcttaatacc
ctcaagatctcgagcgcttataggaaggaacaattctatagagtaaattttattaagctc
aaatataatagatttgttaaatga
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