Lepeophtheirus salmonis (salmon louse): 121116705
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Entry
121116705 CDS
T08214
Name
(RefSeq) patched domain-containing protein 3
KO
K24682
patched domain-containing protein
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsm04990
]
121116705
Domain-containing proteins not elsewhere classified [BR:
lsm04990
]
Other domain-containing proteins
Patched domain-containing proteins
121116705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
121116705
NCBI-ProteinID:
XP_040566929
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All DBs
Position
4:complement(28983818..28988390)
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AA seq
1017 aa
AA seq
DB search
MIPRPNSIYSNTDHSNTGTSQPFLASSANHHDVVERQGGSKTSKWKCQTNCIVRGLESYF
QWHGRFIGKHPVFVICLCFAFLLASFAGFPYYRKEERRIKLWSSDKTPSRLNHEFLHEYF
PSDFRFANVIVEADNVLDPAAIQAMFQMRKKISEIKTNYGDTLRTKCAKMPVVKTPNFLS
FIFGKRRKRRVADDFFTSDYESNFFSDSFEHEMEEEEDNSGFDKDDISYPERLSVEAYPE
PYCNIVDSMEETCFESSVLELWGDNGEYESTEKRLESLSLSDILDTINNKNRSGIFLIKK
NFTHMLGGITRDPITKEIVGAKATRMFWFLKMNIAEARKSPVEGQGVIVDKKTMEFEKEM
LDILLNDTGLPEGLKISPHVSRSFFDIAGPTILGDVKILGIGYSIVFFYVLLMLGKFDWV
GVRVYLAIAGIISVVFGIVFSIGICSAMGFFWSPMHSILPFLLLGIGIDDMFIIIQCWNT
LNPYEKASSSVDKFGYTMRHAGVAITVTSLTDIVAFGIGGTSELPALRSFCIFSAVGIAA
IYYFQVTFFVAWMVFDEKRISSGRNGCCPCIEVKKVKKNTEEIMEDMEVESLSIMSKIFR
FYASHLKFKPVKFLIILITMGFTSLGAYGNYLIEQKFDPIWFIPPHTYLSDWFEANTKWF
SDKGGFFVNVYVYEVDLSVDLMELERIIRAIESQSDIIDSVNSWTTNYIKYVDTHGLAEG
TLYERITQFLHSPMGLQYKRNFLTVNGTADFDCGKSSTGFFNSNESIWYFNFNYKVLESD
SKIKISAMNRIKDILNSANLTSSGRIFPLSQGYSMWETDEIIGYELYKNIIFAFVAVFIM
TWIVISNFVASFLVLFAVMLTVLDVSGIMHFWGLTIDTVSCNFLIISIGLCVDYSTHVAH
RFLIEAEGSRDQRIVKALTNIGPAVMNGGISTFLAFCLLCGSSSHVFITFFKVFFLVVTF
GLFHGLVFLPVILSLIGPISYGSDTVDRSQSVIISDNKQDSINLVSPSKLKDSVDKE
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgatccctcgccccaatagtatttattccaatacggatcattccaatacaggaacatca
cagccttttcttgcgtcgtcagcaaaccatcatgatgtagtagaaaggcagggcggctcc
aagacctcaaaatggaaatgtcaaacaaattgtattgtgagaggattagaatcctatttc
caatggcatggaagattcataggaaaacatccagtctttgtaatatgcctttgtttcgcg
ttcctacttgcctccttcgctggatttccatattatagaaaggaagagcgtcgaataaag
ctctggtcttctgacaaaactccctctcggttaaatcatgaatttctgcatgaatatttc
ccttcagattttcgttttgctaatgtaatcgttgaagcagataatgtcttagatcctgca
gcaattcaagccatgtttcaaatgagaaagaaaatatcagagattaaaacaaattatgga
gatactcttcgaacaaaatgtgctaaaatgccagttgtcaaaacaccaaatttcttgagt
tttatattcggaaaaagacggaaacgaagagttgccgatgatttttttacgagtgattac
gaaagcaatttttttagtgatagctttgagcatgaaatggaggaggaagaagataattct
ggtttcgataaagatgatatttcttatcctgaaagactgagtgtagaagcatatcctgag
ccttattgtaacattgttgatagtatggaagaaacgtgttttgaatcaagtgttttggaa
ctttggggagataatggggagtacgaatccacagagaaacgtctggaatctttatcactt
agtgatattttggacactataaataataaaaataggtctggcatctttcttattaaaaag
aattttactcacatgctgggtggtatcacacgggatccgataaccaaagaaatagttgga
gcaaaagcaacacgaatgttttggtttctaaaaatgaatattgccgaggctaggaagtct
ccagttgaagggcaaggtgtgatcgttgataaaaaaaccatggagtttgagaaagaaatg
ttagatattttactcaatgatactggtctaccagaaggtctaaagatttctcctcatgta
tcaagaagcttctttgatattgccggcccaaccatactcggtgatgttaagatacttggt
ataggatactcaattgtatttttctacgttctcctcatgttgggaaaatttgactgggtt
ggagtgagagtatacctagcaatagctggaatcatcagtgtcgtttttggaattgttttt
tctattggaatttgctctgcaatggggtttttttggtcacccatgcatagtattttacct
tttctccttctaggaattggaatagatgacatgtttataatcattcaatgttggaatact
ttgaatccttatgaaaaagcctcttcctcggttgataaatttggttatacaatgcgtcac
gctggtgttgcaataactgtgacttcattgactgatatagttgcgttcggaataggtggt
acatcagagcttcccgccttaagaagtttctgtatattttctgctgttggaatagccgct
atatactattttcaagttactttttttgttgcgtggatggtatttgatgaaaagaggata
tcatcgggacgaaatggatgttgtccatgtattgaagtaaaaaaagtgaagaaaaatacg
gaggaaatcatggaggatatggaagtagagtctttatcaatcatgtcaaaaatatttaga
ttctacgcatctcatcttaaatttaaacctgtaaaatttttgatcatcttaatcacaatg
gggtttacatcccttggagcatatggtaactacctaattgaacaaaagtttgatccaatt
tggttcattcctccccatacctatttgtctgattggtttgaagctaatacaaagtggttc
tctgataaaggtggattttttgtgaatgtatatgtttacgaagtcgatttatcagttgat
ctcatggagcttgaaagaattattcgagcaattgagagccaaagtgacatcattgactcc
gttaattcttggactaccaattatatcaaatatgttgatacccatggattagctgaaggg
acattatacgaacgaatcactcagttccttcatagcccaatgggactccagtataaacga
aattttttgacagtgaatggaactgcagactttgactgtggtaaaagctccactggtttc
ttcaactctaatgaaagtatttggtactttaacttcaattacaaagtcctggagagcgac
tcaaaaataaagatctcagccatgaatcgtataaaagatatactcaattctgcaaatctt
acatccagcgggcggatatttcccctgagtcaaggctactccatgtgggaaacagatgag
ataattggatatgaactatacaagaacataatatttgcttttgttgctgttttcataatg
acatggattgttataagtaattttgtagcatcatttttagtcttatttgctgtcatgttg
actgtattagacgtctcaggaatcatgcacttttggggtcttaccattgatacagtgagt
tgtaattttcttattatatcaatcggactttgcgttgactattcgactcatgttgctcat
cgctttttgattgaggcggaaggatctagagaccaaagaattgtaaaagcattaactaat
ataggtcccgctgttatgaatggagggatatctacctttttagcattttgtcttctttgt
gggtcctcctcccacgtatttataacttttttcaaagtttttttcctagttgttacattt
ggtttattccacggacttgtttttttaccagtaatactatcattaatagggcctataagc
tacggttctgataccgtagatagaagtcaatccgttattattagtgacaataaacaagac
tccataaatctagtatcaccatctaaattaaaagactcagtggataaagaatga
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