Lepeophtheirus salmonis (salmon louse): 121116744
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Entry
121116744 CDS
T08214
Symbol
Atg13
Name
(RefSeq) uncharacterized protein Atg13
KO
K08331
autophagy-related protein 13
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04136
Autophagy - other
lsm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121116744 (Atg13)
04136 Autophagy - other
121116744 (Atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121116744 (Atg13)
03029 Mitochondrial biogenesis [BR:
lsm03029
]
121116744 (Atg13)
Membrane trafficking [BR:
lsm04131
]
Autophagy
Autophagosome formation proteins
ULK complex
121116744 (Atg13)
Atg1 complex
121116744 (Atg13)
Mitochondrial biogenesis [BR:
lsm03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121116744 (Atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
SH3_14
Motif
Other DBs
NCBI-GeneID:
121116744
NCBI-ProteinID:
XP_071743865
LinkDB
All DBs
Position
4:complement(26997562..27000025)
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AA seq
440 aa
AA seq
DB search
MAVACSPSPSPTPALLPSDQRDHEKFARHFFFKSAQIIVQSRLGEKASCLSQPSPSSSSA
WFNLAIKDIPEIALESKKVYSVKSPGSHTIEISLKTTEGDSMILETWCVAMNNENRNTKL
NNVAYNHLGLLLKSVLCVSRVTPAYKFSRRQGPDSFVVCYRIHAGDPVSPSLLGQGYQSC
FIGQVSNPVGSVSIKVDYRTNMTITPSNASSISSNLMFVKSDHFDLATNTTKKSKSSDDS
SAITSDESQEAFRLFSSDSPHCQQQPPTSTSNTEENCNDESYKRSKFKCGAFARSPKAFQ
DFEEDENDPLFNFLPQETDGVKPHETLASSSVDPEQDPPSPKSSYGDKKRPEQVFEVFDH
VFDDTKSDILEGHPATAVPSKSEFGIFFKDRPDIALGLDPEEKPLDNIEGQILTFEKSLE
KYDEMIKALDCLTSESEQES
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggcgtgttcgccttcgccgagcccgacgccggcgttgcttccttcagatcag
cgggatcatgaaaaatttgctagacatttcttcttcaagtccgcacaaatcatcgttcaa
agtcgcttgggagaaaaggcatcttgcttgagtcagccgtctccttcatcctcaagtgct
tggttcaatttagcgataaaagacattcctgagattgcattagagtctaaaaaggtttat
agtgttaaaagtcctggtagtcacaccatcgaaatatctctcaagactactgaaggtgac
tctatgatattagagacttggtgtgttgccatgaacaacgaaaatcgaaataccaaattg
aataatgttgcttataaccacttgggtttattgcttaaatctgtattatgtgtttctaga
gtaacacctgcatacaagtttagtagaagacaaggaccagattcatttgtggtatgctac
cggattcatgctggagaccctgtatcaccatcattattaggccaaggatatcaaagctgt
tttataggacaagtttcaaaccctgtaggctccgtctcaatcaaagtagattatagaaca
aacatgactataacaccatcgaatgcctcttccatttcttcaaatctaatgtttgttaaa
agtgaccattttgatttggccacaaatactacaaaaaaatccaagagttctgatgattct
tcagcaatcacttctgacgaatctcaagaagcatttcgtttattttcatcagatagtcct
cattgtcaacaacagcctcctacatctacaagcaacactgaggaaaattgtaatgatgaa
agttataaaaggtcaaaatttaaatgtggtgcctttgcaaggagtccaaaagcttttcaa
gattttgaagaggatgaaaatgatcctcttttcaactttcttccacaagaaacagatgga
gtaaaacctcatgaaactttggcttcatcatctgttgaccctgaacaagatcctccttcc
ccaaaatcgtcatatggtgataaaaaacgaccagagcaagtattcgaggtatttgatcat
gtatttgatgatacaaagagtgatattttagaaggtcatcctgctacagcagttccctcg
aagtccgaatttggtatatttttcaaggatagaccagatattgcattaggtttggatcca
gaagaaaaaccattagataacattgaaggtcaaatattaacttttgaaaaaagccttgaa
aaatacgacgaaatgataaaagctcttgattgcttaacgagtgaatcagaacaagaaagt
taa
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