Lepeophtheirus salmonis (salmon louse): 121116771
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Entry
121116771 CDS
T08214
Symbol
Karybeta3
Name
(RefSeq) importin-5
KO
K20222
importin-5
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121116771 (Karybeta3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsm03009
]
121116771 (Karybeta3)
Ribosome biogenesis [BR:
lsm03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
121116771 (Karybeta3)
Pre-60S particles
121116771 (Karybeta3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Importin_rep_6
Importin_rep_4
HEAT_EZ
HEAT
TOR1L1_N
HEAT_2
Vac14_Fab1_bd
Importin_rep_5
HEAT_EF3_N
Adaptin_N
TPR_TNPO3_IPO13_3rd
PDS5
Arm
Cnd3
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
121116771
NCBI-ProteinID:
XP_040566990
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Position
4:12682462..12687423
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AA seq
1103 aa
AA seq
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MSGPSDTDLILALLSTDNDIRSAAEKKYEELESKTKFLMLFERLSNKQNLVAVEGRQLCA
VLLRQLFSADFEKLFTALGADQEHFKNECLEALHREPDKTVRKKMGDMVAEVAINLIDVD
GNNRWPQFLKFLFDSTNSPNAEIKEIAFHLFSSVPSVFGNQEAEHFDTIKQMLMSGLMDP
NHIEVRTSAARASIKFLLTKIEDPPAQKRCQDMLTPILTVTMETITKGVDDTVFKALVEL
AEGIPKYLRAQLDQLYGEMIKLFSNVELCSNWRYLALEVVVTLSETAPSMVRNVAGNHIG
TVVQNILKMMMEIEDEDDWATSDELANEDSDSHSIVAESALDRLACALGGKTIFPHILSC
TPTILQQPDWKCRHAALMAISASGEGCHKQMEEYLPQIMEGVMNFVNDPHPRVRYACCQA
IGQMSTDFAPCFEKKFHDKVIPGLLHLMDDSANPRVQAHAGAALVNFSEDCPKNILTPYL
DPIIQKLEEILSSKFRELVEKGNKMVLEQIVTTIASVADTAEEKFVNYYDRFFPCLKYII
QNANTPELRLLRGKTIECISLIGLAIGGEKFVADAGDIMDLLLKTQTEEPNKDIPDDDPQ
MSYILAAWARICKILGSGFAPYLPLVMGPIMKAVSSRTEVVFLKNDELENEDDMDDWTFV
SLGNDENFGIRTTGLEEKAAACQMLVCYARELKEHFVDYVEDTVKLMVPMLKFLLHDKVR
STAADSFPCLLECARIRGPEYLQSTWEYICPNLLTAIAIEVDVDVKIDFLRSLARCIELL
GMGCLNNEQMQELLGTMIKSFTGHFERQEERLAKRKEEDYDEGVEEKLEDQNDDDVYILE
RLGDIIHVLFATHKDGFLPVFNQILPFAVKLLGQDHPWTDQQWGLCIFDDLIEYTGPASL
NYQEHFLNPMLHYVNSPVAEVRQAAAYGCGVMGQFGGPSYAQIVSQAIPLLVKAIQEKRA
DTDFNNPTENAISAVTKILKWNATAVNVDEILLHWISWLPVYEDLEESPYIYAYLADLVE
SNDPRILGANNDNLPKIIALIAESFCLCALPTDCEAYIRLVNLVKHVQFSSAQLFEVCLT
SLSEPQKRALSEALAAVPVAAAP
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtccaagtgatacggatctgattttagctcttttgagtacggacaacgatata
agatccgcagcagagaaaaaatatgaggagttggagtcgaagacgaagttcctcatgctc
ttcgagcgcctttccaacaaacaaaatcttgtagcagtggagggacgacaactctgtgct
gtccttcttcgtcagctcttttctgcggactttgagaaactcttcactgctcttggagca
gatcaggagcatttcaagaatgagtgtttggaggcattgcatcgagagcctgacaaaact
gtgcgcaaaaaaatgggagacatggttgcggaagtggcaatcaatctgatcgacgtggac
ggaaacaaccgatggcctcaattccttaaattccttttcgactccaccaattcccctaat
gcagaaattaaagaaattgcatttcacttattcagctctgttccaagtgtatttggaaat
caagaagctgaacactttgatactattaaacaaatgttaatgtccggtctcatggatccc
aaccacatagaggtgcgtacatctgccgccagagcatccatcaaatttcttttgacaaag
atcgaagaccctcccgcacagaagcgctgccaagacatgctaaccccaattcttacggtt
acaatggaaactatcactaaaggagtcgatgatacagtttttaaagctttagttgaactt
gcagagggtatccccaaatatttgagagcacagttggatcaactctatggggaaatgatc
aaattgttttctaatgttgagttatgttcaaattggcgttatttggctttggaagtggtt
gtcactctgagtgaaacagccccttccatggtacgcaatgtggctgggaatcatattggc
acagttgttcaaaatattttaaaaatgatgatggaaatcgaggatgaggatgattgggct
acatcagatgaactggccaatgaagacagcgactctcattctattgttgcggaatcagcg
cttgatcgactcgcctgtgctcttggaggcaagactatatttcctcatatcctatcctgt
acaccaaccattcttcaacaacccgactggaaatgcagacacgctgccctaatggcaata
tctgcttcaggagaaggatgccacaagcaaatggaagaatatcttccacaaattatggaa
ggagttatgaactttgtgaatgatccacatcctcgtgttagatacgcctgttgtcaagct
attggacaaatgtcaacagatttcgccccttgttttgagaaaaagtttcacgacaaagtt
attcctggcctcttacaccttatggatgactcggccaatcccagagttcaagctcatgct
ggagcggcattggttaactttagtgaagattgccctaaaaatattttaactccatacctt
gatccaattattcaaaaattagaagaaatactgtcctctaaatttagagaactagttgaa
aaaggtaataaaatggttttggaacaaattgttactaccattgcctctgttgccgatact
gcggaagaaaagtttgtcaattactatgatagattttttccttgtcttaagtatattatt
caaaacgcgaatactcctgaacttcgccttcttcgaggaaaaacaatagaatgtatttcg
cttattggtcttgctattggaggtgagaaatttgtcgctgatgcaggagatattatggat
ttgttactcaagacacaaacagaagaaccaaataaagatataccggatgacgatccacaa
atgtcttatatattagcggcatgggctcgtatctgtaagatactaggatctgggtttgcc
ccatacttaccccttgtgatgggccccattatgaaggcagtctcctcccgaactgaagtt
gtctttttaaaaaatgacgagcttgaaaatgaggatgatatggatgattggacctttgtg
agcctgggtaacgatgaaaattttggaataagaaccactggattggaggaaaaggcagct
gcttgccaaatgttggtgtgctatgcacgtgagctcaaggaacattttgttgattatgtt
gaagacacagtaaagctcatggtacctatgttgaaatttcttctgcatgataaagttaga
tcaacggctgcggattcttttccttgtctattagaatgtgctcgaattcgtggacctgaa
tacttgcaaagtacatgggagtacatatgtccaaatttgttaactgccattgcaatagaa
gttgatgtggatgttaagattgactttcttcgttctcttgctagatgcattgagctgtta
ggcatgggatgtcttaataatgagcaaatgcaagaattgctaggcactatgatcaaatca
ttcactggtcatttcgagagacaagaggaaagactggcaaaaaggaaagaggaggattat
gatgagggtgttgaagaaaagttggaagaccaaaatgatgatgacgtttatattcttgag
cgacttggagacatcatccacgttttatttgccacacataaagatggtttcttgccagtt
ttcaatcaaattttgccatttgcagtaaagttgttgggtcaagatcatccatggacggat
caacaatggggtttatgtatatttgatgacctcatcgaatacacaggacccgcttctttg
aattaccaagaacattttctcaatcccatgcttcattacgtgaatagtcctgtagcagaa
gtgagacaagctgctgcatatgggtgtggtgtaatggggcagtttggaggccctagctat
gcacagattgtgtctcaagcaattcctttattagtgaaagctattcaagaaaagcgagcc
gatactgattttaacaatccgacagagaacgccatatctgcagttactaaaatactcaag
tggaacgcaactgctgtcaatgttgatgaaattttactccactggataagttggttgccg
gtatatgaggatttagaagaatctccgtacatatatgcatatttggctgatttagtggaa
tccaatgatccccgaattttgggagccaataatgacaatcttcccaaaataattgcattg
atagcagagtcattttgtttatgtgctttaccaacggattgtgaggcgtacattagactt
gtcaatcttgtcaaacatgttcagttttcaagtgcccaattgtttgaagtatgcttgacc
tcgttgtcagagcctcaaaagagagcgttaagtgaagcacttgccgctgttcctgtagcc
gctgcaccttaa
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