Lepeophtheirus salmonis (salmon louse): 121116826
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Entry
121116826 CDS
T08214
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121116826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121116826
Enzymes [BR:
lsm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121116826
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
HECT type E3
121116826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
121116826
NCBI-ProteinID:
XP_040567057
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All DBs
Position
4:10979425..10984283
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AA seq
1102 aa
AA seq
DB search
MFSGSKLQNHANKNKDAFILAAKEAREERKAERVKEQASITIQSHIRGWLARLKIRNEII
KKFNAALEKRDPLPIDVYIASRNYLNFVPQNLNVKIYSERFEKLCAFIVNSISSESPKVS
YLVVFFNKEHSLRWISHMKLILSLTSNRIGTISSNALDSKEISTLLSVLVSFTSVKTWAI
LKMFDKLVAGMKQLTSNFMGHLVNSADIYLNIKKVLLNGVCSRFKLKKTSFHALIVLITR
PIVAADFSDKLLSLFILHILSIPGFIHHIDDDVFSEFDNDNLLYKCLVLLSKDDQQLKIY
FNVLEGSYALCLTANLIHWIYRSSNQSLAFDLNTIYVLNHLLESCGFYVTTKQSNLSHWH
PILGWFSAGIDQYLQDSMGLVKNQIAKLWSPIMLKRMIIPLQAVVDKLPSDFRSNDSGLE
VPDPPSPGDPNIAKQLMKKAMEKTKNSGVTKFINSVSSSTSLASYSNSSFSMSSSSKICT
KLGSHEATHVSNICALYQTAIKTLSQLKLEIISCLCYKNLLLSPLFTFLSSLGPTLGLKQ
FSDHLTSNPMRQMSQPIPPEFQTLALLCDCVSYLVTILDDVEFYEKKSPFDVRHYVALSY
CVNNLLYKAVNDDLITDPETNPLCNSLLGLLGVLYRRDNRRQYVKLNHWLIKDCKPNTLI
TDSLKEKKSSLFLLQKLPHIIPHEDRVVFFRKKVMADKSAIGVASTREYWEPTASTLITV
HRSRIVEDGYRHLGKLSSRSLKGVIRVKFINTQGLDEAGIDQDGVFKEFLEETIKRVFDP
GLNLFCSTSDNRLYPSPTSHLTENYLQLFEFVGKMIGKAVYEGIVVEIPFAPFFISQILS
KDHSAYYSYLDELPSMDPELYKNLTYIKYFDGNVTDLDLTFSYDQDVLGRVVTHELIEGG
RSVLVNDCNKISYIHHVAQFVLHSQIKEQVAAFTRGFRAILPIDWLNLFSPPEVLRLISG
DNLPLDLKDLRRHTHYYGGFHDSHKVIVWLWEILDRDFDDKERSSFLKFVTSCSKPPLLG
FENLEPAFSIRCVEVAEDEDDGDTVGSVLRGFLALKKRDPVNRLPTASTCFNLLKLPNYQ
KKATLRDKLRYAISSNTGFELS
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgttttctgggagtaaactacaaaaccatgccaacaaaaacaaagatgcattcatcctt
gctgcaaaggaagctagagaggagcgaaaagctgaaagagtaaaggaacaggcttccatc
actatacaaagtcatatccgtggctggcttgcacgcttaaagattcgaaatgaaatcatc
aagaagtttaacgccgccttggaaaaaagggatccgcttcctattgatgtttatatagca
tcaagaaactatctcaattttgttccacaaaatctaaatgttaaaatctatagtgagcgc
tttgaaaagctctgcgcttttattgttaatagtatttcctccgagtctcctaaagtcagt
tacctcgtcgttttcttcaacaaggaacattcactgagatggatatcccatatgaaattg
attttatctctgacttcgaaccgaatcggaacaatatcttcaaatgctctagattctaag
gaaatatctacattactaagtgttctagtctcatttacctccgtcaaaacatgggcaatc
ctaaaaatgttcgataagctcgtcgcgggaatgaaacaactaacatctaattttatggga
catctcgttaattcagcagatatctatctgaatattaaaaaagttcttttaaatggagtt
tgttcacgttttaagctcaagaaaacgtcattccatgccctcattgttcttataactcgt
cccatagtagctgcggactttagtgacaagcttttatccttattcattctacatatactc
tctataccaggattcattcatcacatcgatgatgatgttttttctgagtttgataatgat
aatttactctacaaatgtttggttctgttatcaaaagatgatcaacagttgaaaatctat
tttaatgtattggagggctcatatgcactttgtctaacagcaaatctaattcactggata
tatcgtagcagcaatcaatcattagcttttgatttgaacacaatttatgtactgaatcac
ttattagagtcttgtggattttatgtgacgacaaaacagtcaaatttaagtcactggcat
ccaattttaggttggttctctgcaggaatagatcaatatttgcaagattccatgggcttg
gttaaaaatcagattgccaaactttggtcccctataatgttgaagcgtatgattattcca
ttgcaggcagttgtggataaattgccctctgattttcgttctaatgatagtggtttagag
gttccagaccctccttcccctggagatccaaacattgccaagcagcttatgaaaaaggct
atggaaaagacaaagaattcaggtgtcactaaattcataaatagtgtttcctcatcgact
agtctggcttcatatagtaattcatccttttcaatgtcatccagttctaagatatgcacc
aaattaggaagtcatgaagcaactcatgtatccaacatctgtgccctctaccaaacagcc
ataaaaactctatcccaactaaagctcgaaattatatcgtgcctctgttacaaaaattta
ttacttagtcccctgtttacctttctatctagtctgggtcctactttgggcctcaaacaa
ttttctgaccatttaacgtccaaccctatgcgtcagatgagtcaacccattccaccagaa
ttccaaacattagcccttctctgtgattgcgtgtcttatctggtcactattttagatgat
gttgaattttatgagaaaaagtcaccctttgatgttcgacattatgttgctctctcttac
tgtgttaataatttgttatataaagccgttaatgatgatttaattacggatccagagaca
aatccactttgtaatagtttgcttggactccttggtgtattatataggcgggataatcgt
agacagtatgtaaaactgaatcattggctgattaaagattgtaaacccaatactttaatc
acggactcattgaaggaaaagaagagctccttgttccttctacagaaacttcctcatatc
attccgcatgaggatagagttgtattctttcggaaaaaagtgatggctgataaatctgct
ataggtgttgctagtacaagagagtactgggagccgactgcatctacacttattactgtt
catcgatctagaattgttgaggacggttatcgccatttaggaaaactaagttctcgcagt
ttgaaaggtgttatacgagtgaagtttatcaatactcagggtcttgatgaggccggtatc
gaccaggatggtgtttttaaagagtttttagaagaaacaataaaaagagtttttgatcct
ggactaaatctattttgcagtacttctgataatagactatacccttctcctacgtcgcat
ttgacggaaaactatctacagctatttgaatttgtgggtaaaatgattgggaaagcggtg
tatgaagggattgttgtagagattccttttgcccccttttttatatcgcagattctctca
aaagatcattcagcatactatagctacttggacgaacttccatccatggatccggaatta
tataaaaatttgacttacataaagtattttgatggcaatgttactgatctagatttaaca
ttctcttatgatcaagatgtactcggtcgtgtcgtgactcacgagctcattgagggtggt
cgcagtgttttagtgaatgattgcaacaaaataagttacattcatcatgttgcacagttt
gtccttcatagtcaaatcaaggagcaagtcgctgcttttacacgaggattccgtgctata
cttcccattgactggctaaatttgttctcacccccagaagttctgcgacttatatctgga
gataacttgcctctagatttaaaagatttgagacggcatactcattattacggaggtttc
cacgattctcataaagttattgtatggctttgggaaattttggatcgagattttgatgat
aaagaacgctctagttttcttaaatttgttacctcttgctccaagcctcctttgcttggt
tttgaaaacttagaacctgcattttccatccgatgtgttgaggttgccgaggatgaggat
gatggagatacggttggatctgtcttaagaggatttcttgctttaaagaaaagagatcca
gtcaatcgtttacccactgcatccacatgttttaaccttctgaaattacctaattatcaa
aagaaagcaacactaagagataagttaagatacgctatttcatccaatactggctttgaa
ctttcctaa
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