Lepeophtheirus salmonis (salmon louse): 121117158
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Entry
121117158 CDS
T08214
Name
(RefSeq) dorsal-related immunity factor Dif
KO
K09254
c-Rel proto-oncogene protein
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121117158
Transcription factors [BR:
lsm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
121117158
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GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
121117158
NCBI-ProteinID:
XP_040567422
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Position
5:18427467..18430400
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AA seq
594 aa
AA seq
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MESNSKNLSGIVRELELAADELGAELKSPSCFVIPPTEEGQEELVITLVDPEQSLKRKSE
GDHIMANLTGFGNSTATVGGHLNNDSSIPSNNNNPNVTPYLQIIEQPAYNKLRFRYECEG
RSAGALVGENTKDKKRTYPTIQIVGYHGPAVVVVSCVEDKAPYRAHPHNLVGKDGICKKG
VCSMDINNDEMMCSFQNLGIQCVKRKDAPDSLTQRQMIRVDPFKQGFAHKNSAVNLNAVR
LCFQAFLKNGESLTPLPAVVSNTVVDRKVHTDLHIYDQSDDWSSVEGGKKIIILSEKVCK
DNIEVRFTQYAEDGTILWHSKAEFGPSAVHKQYAISFLTPPYFDKDIKQPIKVSMYLYKP
CENVASEHVEFQYVPIGYYSFSKPMFGLKDNKQATEAKKRSKPQGQQDDLSSGSVLGPRK
IPTAQLRHGGGAVTIVEQNNEDNKRRIEERLKEAVVAGGQGRFRGTGIGYDHQIDPATYI
PKSECYTLPQLPEHQPEYNQPIYQPQVTFPQPNQPPESSHFISLDNMNISDLVDLGLSAN
IDSNLNINDVNSKATGHHESQHSKSQPSQLQTPDISGNFNLSDGTLRKNDLNKL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaactctaaaaacttaagtggcattgtgcgtgaattagaattagcagctgat
gagttaggagcagaattgaaatccccaagctgttttgtaattcccccaactgaggaagga
caagaagagttggttataactcttgtggatccagagcagtctttgaagcgtaagagcgaa
ggtgatcatatcatggcaaatcttactgggttcggaaattcgactgctaccgttggggga
catctaaataatgactcttcaattccaagcaacaacaacaatcccaatgttacaccttat
ttacaaataattgagcaacccgcttacaataagctaagatttagatatgaatgtgaaggt
agaagtgctggtgcactcgtcggagaaaacactaaggataagaagcgtacatatcctact
atacaaatcgttggatatcatggccctgctgttgtcgtcgtatcttgtgtagaagataag
gctccttatcgcgcacatccacataatttagtaggtaaagatggtatttgtaagaaagga
gtttgctccatggatatcaataatgatgaaatgatgtgtagcttccaaaatcttggtatc
caatgtgtaaaacgtaaagatgctcctgattcacttactcaaagacaaatgattcgtgtg
gaccctttcaagcagggatttgcacataaaaactctgctgttaatctcaatgcagtgaga
ctttgctttcaagcttttcttaaaaatggtgaatctcttactcctttaccggctgttgta
tccaacactgttgttgatcgaaaagtacatacagatcttcatatctacgatcaatcagat
gattggtcatccgttgaaggtggcaaaaagataatcattctctctgagaaggtctgtaag
gacaacatcgaagtacgctttactcaatacgcagaagatggaactattttgtggcactcc
aaagcagaatttggtccctctgctgttcacaagcaatatgcaatcagtttccttacacct
ccttattttgataaagacataaaacaacccattaaagtatccatgtacctctacaagcca
tgtgaaaacgttgctagcgaacatgttgagttccaatatgttcctattggctattattca
tttagtaaacccatgtttggcctaaaggataacaaacaagccacagaagccaaaaaaagg
tcaaaaccgcagggacaacaggatgatctttcctccggatctgttctcggcccgagaaaa
atacccacggctcagcttcgccatggtggcggagctgtaacaattgtagaacaaaacaac
gaagacaataaacgtagaattgaagagcgtcttaaagaagccgtagttgctggtggacaa
ggacgatttaggggaactgggataggttatgatcatcagattgatccagcaacttatatt
ccaaaaagtgagtgttatactctaccacaacttcccgagcatcaaccagagtataatcaa
cctatttatcaaccccaagtcacttttcctcaaccaaatcaaccaccagaatcttctcac
tttatttcccttgataacatgaacatatcggacttggtggatttaggattgagcgctaat
atagattctaatttaaatataaatgatgtcaattctaaagcaacaggacatcatgaatct
caacactctaagtctcaaccgtcacaacttcaaactccggacatatcaggaaactttaat
ctttctgacggaactttaaggaaaaatgatttgaacaagttataa
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