Lepeophtheirus salmonis (salmon louse): 121117232
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Entry
121117232 CDS
T08214
Symbol
PolE1
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03030
DNA replication
lsm03410
Base excision repair
lsm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121117232 (PolE1)
03410 Base excision repair
121117232 (PolE1)
03420 Nucleotide excision repair
121117232 (PolE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsm03032
]
121117232 (PolE1)
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121117232 (PolE1)
Enzymes [BR:
lsm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121117232 (PolE1)
DNA replication proteins [BR:
lsm03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
121117232 (PolE1)
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
121117232 (PolE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
YqzM
Motif
Other DBs
NCBI-GeneID:
121117232
NCBI-ProteinID:
XP_040567537
LinkDB
All DBs
Position
5:complement(27700053..27713053)
Genome browser
AA seq
2248 aa
AA seq
DB search
MVLHNSGRYMKESSSKEDENKTDYRLRESKENDAIDSKYGFVRISEYTERVGFLMNMHST
EILDDDKRLIAAVDYYFIEEDGTRFKVSVSFKPYFYVKVRNGLLQETTAFLSKKYGGVIS
SIEQVRKENLDLANHLVGLQEKYIKLSFATVSDLQKVRKDVLATVRRNKRNGQKSVYAME
DNRSSSNNFDNIEDIREHDIPFHVRVSIDKSIYVGCWYSVKVKGTKEDPIIIKREDLIER
PDAIVLAFDIETTKLPLKFPDANVDQIMMISYMIDGQGYLITNREIISEDVEDFEYTPKP
EYEGPFIVFNEPNEMSLIQKWFDHILDVKPHIFVTYNGDFFDWPFIEARATIHGMDMANE
IGFSKNREGVFSSRPAAHMDAFCWVKRDSYLPVGSQNLKAVTKAKLRYDPVEVDPENMVR
MANEQPQELSNYSVSDAVSTYYLYMKYVHPFCYALCTIIPMEPDEVLRKGSGTLCEALLC
VEAFKVNIVFPNKHETILNKMTDDGHILDSETYVGGHVEAIESGVFRADIPCRFRMVPDA
FQTLIDDVERCMRRAIEVEEGVPLNHVENFEDIINEIKKKLVDLRDTPVRLENPIIYHLD
VGAMYPNIILTNRLQPSSVVDEADCAACDFNKPGATCQRRMPWMWRGEVMPASRSEFQRI
QQQLEMEKFPPLFPGGNQRAFHELNKEERATYEKKRLSEYCRKAYKKTHITKMEECYTTI
CQKENSFYVDTVRAFRDRRYTYKGLCKVAKKEVSEAVASGDATLIKSAKNKEVLYDSLQL
AHKCILNSFYGYVMRKGARWYSMEMAGIVCYAGAGIIKCARELVEQIGRPLELDTDGIWC
VLPASFPENFTFKTNNSSPKKKNVTVSYPGAVLNIMVQDNNTNEQYHELINAEKLEYKQT
KENTIFFEVDGPYLSMILPASKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQIIKI
FQSTVFEAFLKGNSLQSCYDSVAKVADFWLDVLYSQGVNMPDQELFDLISENKSMSKTLA
EYEGQKSTSISTAKRLAEFLGDSMVKDAGLSCRFIISKKPEGAPVTERAIPLAIFDAEPS
VKKHYLRKWLKDNSMSNFDIRKILDWNYYIERLGGTIQKIITIPAALQGISNPVPRISHP
DWLHKKIMEKSDVFKQRKINQMFTAQSKKVMDEIPMDVNERDIFDIEDMDKPVSRPLALK
NLTITNKRKRFSDNTSKDVEDLTKNWQEVLGNPPNRSNVKDWINFHKKKWAYQAKQRVAG
MHGKNKKVKAGQVLSNAGSTIGAFLRKTQKSLLDSIWQIIHIVETGNPGLFRLWALIGND
LHQIKLIIPRIFYVNQRITKEDDSKENTMRRRIQKTLPRSHPSMNLYEYSVPEHLFREHS
SDLVTDLSTPDVEGIYETQIPLEFRVLVELGCVVEVDKKIAKQIGDTDTFELGWLNFKTL
AHNDYLADNNYKAIYFYYHKVGNKAIYGVFIPVSKKAHVFVSDTVRSNQLPNLNLLYNAE
RTAVMQNETLKDVPESDYNFEVRIETDVRQINRQITKILQGYRDEKRGPTIILAQSIADF
QMLSSVIPTFVEFPIVPLHVSDHDNLYNVLDWQRVGARHMIRHFIKSNAYFMATLEQCRY
FHVPIGNIPKDNTAFGADLFYARHLKKQNFVLWCSPTEKPDLGGKEADDSRLLTEAEDSC
LMTTVNNPGAYRTVCVEIEIDALAVSALLQAHNIHDMEGTSGSIAFDTMPQASLEEMLGG
TASNLCSYDETALVSGAFRVLRTMVHVWLKEVTQYRNVFADYQIIHFYRWLRSPNSLLYD
PALRKTLQNLMKKMFMQLVAEFKRLGAIVIFGDFNRLIICTKKRNFKDALAYVEYVTNTI
HEKEIFNSIDMKFTKAWDYLLWCDPSNYGGVKSLSPRNLTEKELDVQDEEDTEEGFVEKD
FNEDDDEPELDMSWNIASYLPDAGACHKNFNTVIAGFISSMYQFMVSEAERVAPGCTPVR
RKFNPSQSQPTPRRKNNSKSQGSVEENITDIDSFAQDLVSGELAQRLYSVTQKIHKKLPE
HKGNDTYNVFPVLPGSHLKLTNPALEFVKALVKVLSLDYSITDHVHKLRRDLLKLIGIGE
FSVAAEWKDPCISFVLPEVICKQCNHCRDIDLCKDPHRGEQNGIPVWLCPSIQCETPYDT
YELEALLLDVVRRKTMGWVLQDLKCIKCSGIKEANMTKYCLCAGAFETISRFHDLQQLLM
TFKSIAEHYNMPMLEELVTWTLEMNINT
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
atggttcttcataactctggtcgctacatgaaagaatcatcttcgaaagaggacgagaat
aagacagactaccgtctacgggagtccaaagagaatgatgccattgattcaaaatatgga
ttcgttcggataagtgaatacaccgaaagagtcggattccttatgaatatgcactccact
gagattttggatgacgataaacgattgattgctgctgttgactattattttattgaagag
gatggaactcgattcaaagtttctgtgtcttttaagccttatttttatgtcaaagttcga
aatggtttattgcaagaaacgacagctttcttaagtaagaagtacggtggagtcatttcc
tccattgaacaagtcaggaaagagaatctagatcttgcaaatcatcttgtgggtcttcaa
gaaaagtatattaaactcagttttgcaacagtatctgatcttcaaaaggtgcgtaaggat
gttcttgcaactgtaagacgaaataaaagaaatggtcagaaatcagtctatgcaatggaa
gacaatagatcttcctctaacaacttcgataacattgaagatattcgggaacatgatatt
ccatttcatgttagggtatctatcgacaaatctatatatgttggatgttggtattcggtg
aaagtgaagggaacaaaggaagaccccatcattatcaagagggaggatctgattgaaaga
ccggacgccattgttctagcctttgatattgagacgactaaacttcctcttaaatttcca
gatgctaatgtggatcaaatcatgatgatatcatatatgatagacggtcaaggctatctt
ataaccaatagagaaataatatctgaagacgttgaagattttgagtacacgccaaaaccc
gagtacgaaggtccattcattgtatttaatgaacccaacgaaatgtctttaatacaaaaa
tggttcgatcatattctcgatgtgaagccacatatatttgtaacgtacaatggagatttt
ttcgattggccgttcattgaagctcgagcaacaattcacggtatggatatggctaatgaa
attggattttctaaaaatcgcgaaggtgtattctcgtctcgacctgcagctcatatggat
gcattttgttgggtcaaaagagattcttatttacctgtaggatctcaaaatttgaaagct
gttaccaaagcaaagcttagatatgatcctgttgaggtagatccagagaacatggtcaga
atggctaatgagcaaccccaagaattgtcaaactattcagtttctgatgccgtttctact
tactatttatatatgaagtacgttcatccgttttgttatgcactttgcaccattattcca
atggagccggatgaggttttaagaaaaggatctggaacgttgtgtgaggccctactctgc
gttgaggcttttaaagtcaatattgtattcccaaacaaacatgaaacgatattaaataaa
atgactgatgatggtcatatattagactcagagacgtacgtaggtggccacgtcgaagcg
atagaatctggagtatttagagctgacattccttgtcgatttcgtatggttcctgatgcc
ttccaaacactaatcgatgatgtagaaaggtgtatgagacgtgcgattgaagttgaagaa
ggtgttcctttgaatcatgtcgaaaactttgaagacataatcaatgaaattaaaaaaaag
cttgttgacctgcgagatacccctgttcgattggagaatccaattatctatcacttagat
gtgggtgccatgtaccctaacattatcctcaccaatcgtttgcagccatcatcggttgtc
gatgaagctgattgcgctgcttgtgatttcaacaaaccaggagctacatgccaaagacgt
atgccctggatgtggagaggagaagttatgccagcatcgcgctctgaatttcaaagaatt
caacaacaactagaaatggaaaaattccctccactatttcctggagggaaccaaagagct
ttccatgagttaaacaaagaagaaagagctacttatgagaagaaaagactctcggaatat
tgtcgtaaggcttacaaaaaaactcatataacaaaaatggaagaatgctacactactatc
tgtcaaaaggaaaatagtttttacgttgatactgtgcgagcgtttcgtgatcgtcgttat
acatataaaggattgtgcaaggttgctaaaaaagaagtttctgaggcagtggcatcagga
gatgctactctaattaagtctgccaaaaataaagaagttctttatgactctcttcagctg
gcacataaatgtattttaaattccttttatggttatgtcatgcgaaaaggagctcgttgg
tactccatggaaatggctggtattgtttgctacgctggagctgggattatcaaatgcgct
agggaacttgttgaacaaattggaaggccacttgagctcgacacagatggaatatggtgt
gtattacctgcttcttttccagaaaattttacatttaagaccaataattcgagtcctaag
aaaaaaaatgttactgtatcatatcctggcgcggttttaaatattatggtacaagacaat
aatactaatgaacagtatcatgaactaataaatgctgaaaaattagaatacaagcaaacg
aaggagaatactatatttttcgaagttgatggaccgtatttatctatgatactcccagct
tcgaaagaagaaggaaagaagctgaagaaacgttatgccgtatttaattttgatggttca
cttgcagagttaaaaggatttgaagttaaacgtcgaggagaactacaaattattaaaata
tttcagtccacagtttttgaggcttttctcaaaggaaattcgcttcaaagttgctatgat
tccgttgctaaagtagcagatttttggcttgatgttctttatagccaaggtgttaatatg
cctgaccaagagttgtttgatcttatatctgaaaacaaatcgatgtccaagactttggct
gaatatgaaggccagaaatcgacttcaattagcactgctaaaagactggctgaattttta
ggtgatagcatggttaaagatgctggtctaagttgtagattcataattagtaaaaagcct
gagggtgctccagtgactgagcgggccataccattagcaatttttgatgctgaaccatct
gttaagaaacattatttaaggaaatggcttaaagacaattcaatgtcgaattttgatatc
cgtaaaatacttgattggaactattatatagagcgcttgggcggcacaattcaaaaaatt
attacaattcctgcagcattacaaggaatttccaatccggttcctcgaatatcgcatcca
gattggttacataagaaaattatggaaaagtctgatgtttttaaacaaagaaaaataaac
caaatgtttactgcacagtctaaaaaagtgatggatgaaataccaatggatgtgaatgaa
cgggatattttcgatattgaagacatggataagcctgttagcagaccacttgctttgaag
aatttgacaataacaaataaacgtaaaagattttcggacaacacgtccaaagatgttgaa
gatttaaccaaaaattggcaagaagttctcggcaatcctccaaaccgctctaatgtaaaa
gattggattaattttcacaagaaaaaatgggcgtatcaagccaaacagagagtagctgga
atgcatggtaaaaataaaaaagttaaagcagggcaggtgttaagtaatgcaggctcaact
attggtgcatttttgcgtaaaacccaaaaatctcttcttgattcaatttggcaaataatt
catattgttgagacgggtaatcctggcttatttagactttgggcacttattggaaatgac
ttacatcaaattaaattaatcataccacggatcttttatgttaaccaaagaataactaaa
gaagatgatagcaaggagaatacaatgcgtagaagaatacaaaaaacactgcctcgatca
catccttcaatgaacttatatgaatactctgtgccggaacatctttttcgagaacattcg
tcagatttagtgacagatttgtcaactccggatgttgaaggaatttatgagactcagatt
cctcttgaatttcgggtattagtagaattaggttgtgtcgttgaggtggataagaaaatt
gccaaacaaattggagatacagacacttttgagttgggatggctcaattttaaaactctc
gctcataatgattatcttgctgataataactacaaggcaatctacttttattatcacaaa
gttggaaataaggcaatttatggagttttcattcctgtttcgaaaaaagctcatgtcttt
gtctcagatactgtacgatcaaaccaattgccaaatcttaatttattatacaatgctgaa
agaactgctgttatgcaaaatgagacacttaaagatgttcctgagtcagattataatttc
gaagttcgtattgaaacagatgttcgacaaatcaaccgtcaaataacaaaaattttgcaa
ggatatcgggatgagaaaagaggacctactattattttggctcagtcaattgctgacttc
caaatgctttcttcagttatacccacatttgtagaatttcctattgtaccattacatgta
tcagatcatgacaatctttataatgtcttagactggcaaagagttggtgcaagacatatg
atacgacattttattaagtctaacgcatattttatggctacattggaacaatgtcgatat
tttcatgttcctattgggaatatcccaaaagacaacactgcttttggtgctgatttattt
tacgctagacatttgaaaaaacagaatttcgttttatggtgttctccaacagaaaaaccg
gatttaggagggaaagaggcagatgatagtcgtttacttactgaagcagaggactcctgt
ttgatgactactgtgaacaatcctggtgcttaccgtactgtttgtgttgaaattgaaatt
gatgctcttgctgtgagtgcattacttcaagctcataatatacatgacatggagggtaca
tcaggatcaattgcttttgatactatgcctcaagcgtctcttgaagaaatgttgggaggt
acggcatcaaacctttgtagttatgatgaaactgctttagtgagcggagcttttcgtgtt
cttcggacaatggtgcatgtttggctaaaagaagtcactcaataccgaaatgtatttgct
gattatcaaataattcatttctatagatggcttcgctccccaaattctcttctatatgac
cctgcccttagaaagactctacaaaacttgatgaaaaaaatgtttatgcagttagtagct
gaattcaagagattaggtgcaattgtcatttttggagattttaataggctcattatatgt
accaaaaaaagaaatttcaaagacgcattggcgtatgttgaatatgttaccaatactatt
catgagaaagagatttttaattctatcgatatgaaattcactaaagcgtgggactatttg
ttatggtgtgatccatctaattacggaggagtaaagagtttgagtcctagaaatcttaca
gaaaaggaacttgatgtgcaagatgaggaagacactgaagaaggttttgtggaaaaagat
tttaatgaagatgatgatgaacctgaacttgacatgtcatggaacatagcttcttattta
cctgatgcaggggcctgccataagaattttaatacggttattgctggttttatttcatct
atgtatcagttcatggtgtctgaggctgaacgtgtagctccgggttgtactcctgttagg
cgcaaatttaatcctagtcaaagtcaacctactcctagaaggaaaaataattcaaaatcc
caaggaagtgttgaagaaaatattacagatatcgattcatttgctcaggatttggtatct
ggagaattagctcaaagactttattccgtaactcaaaaaatccataaaaaacttcccgaa
cataaaggaaatgatacttataatgttttccctgttcttcctggatctcatttaaagcta
acaaatccagctcttgaatttgtcaaagctttggtcaaagttctttctttagattattca
attacggatcatgttcacaaattaaggagagatcttttaaaactgataggaataggagaa
tttagcgttgcagcagaatggaaggatccatgtatatcatttgttttacccgaggtcata
tgtaagcaatgcaatcactgtcgcgacattgacttatgtaaagatcctcatcgaggtgaa
caaaatggaattcctgtttggctatgtccatccattcagtgtgaaacaccctacgataca
tacgaattggaagcacttcttcttgatgttgttcgacgaaaaactatgggctgggttctt
caggatttaaaatgtatcaagtgttctggtattaaagaagccaatatgactaaatattgt
ttatgtgctggggcttttgaaactatttcacggtttcatgatcttcagcagctacttatg
actttcaaaagtattgctgagcattataatatgcccatgttggaggaattggttacctgg
acactagaaatgaatataaatacttaa
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integrated database retrieval system
