Lepeophtheirus salmonis (salmon louse): 121117234
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Entry
121117234 CDS
T08214
Name
(RefSeq) AP-4 complex subunit epsilon-1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121117234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121117234
Membrane trafficking [BR:
lsm04131
]
Endosome - Golgi transport
Others
AP-4 complex
121117234
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
RICTOR_M
INTS1_R4
SYCP2_ARLD
Motif
Other DBs
NCBI-GeneID:
121117234
NCBI-ProteinID:
XP_040567541
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Position
1:complement(13727283..13730139)
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AA seq
754 aa
AA seq
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MSAMIGRTWNYLTAAVSPESNSTIKWTPPKDLASPGSDLPKGLASFLKALVTQPDYQRII
EDNITLVKAKLEEPDVKNHAVADCLLRMTMADMLGFNVEFARVHALKLAQKGDSLPLRKI
GYLTSVALLKESQDPLNLLLVNTIIKDLSSKNPIEINFALCASSSHLIPDEVIPLLLPSL
ISKTTHIKDFIRKKALASLHKLLKRNPELACSIEGPTRRCLIDPNPGVVAVAIQVAMDLV
EQVDLFDILPGILDVADQILDDKFPNEFKYKSLSAPWMLCDAISLLSRINKKETNNVSSK
LSERYVHFLKRVISKSFGSKEMISCAIIFECIKAISILIDKNSKTDLITKALPAVSKFLQ
DKSSNLKYMGIASMELIFMDTDLVLSTEQENIISSCLSYPDESIRRKTLSLLYVLAHDKN
VRQICTTLLSYIKESDDKYKRKEFITKTSDLADKFIDSQGMDWYINVLLRLSQLSPSEMR
YDFLYRIKSTLGSKCSNPKEQSSIGSKLKSILSRFLLSDGVKISKSITSLYIWCWSHFDP
KFEDFSSIIELAIKADNEESVIDALSYIFIHNPTVCFPMEVHEFITKCLENQNERIKDKA
REIKFLIKILEGETLPKVSTLDDFTLTFLDKYIVEKIGTKQQNPFNKKRSPYHEAVIPFE
DINVDKSKLRLAPYNELSSLNPNNNTVLNTLAEDELSEVEHSIWSFDGCKKDENNIISNK
LSDSMESFFVEEKNQSFGLDSLLKDDLLTALDEE
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccatgattggacgtacctggaattatcttactgcagccgtgagtcctgaatcc
aattccaccataaaatggactcccccgaaggatttggcaagtccgggatctgatttacct
aaaggcctggcttcattccttaaagccttggtgactcagccagactatcaaagaattata
gaggacaacatcactttggtcaaggctaaattggaagaacctgacgtgaagaatcatgca
gttgctgattgtttactacgtatgacaatggcggatatgttgggatttaatgtagagttt
gctcgagtccatgctttaaagctggcgcagaaaggagactctcttccccttcgcaaaata
gggtatctcacctctgttgcactactaaaagagtcacaagatccattaaatctattatta
gtaaacaccatcatcaaggatctatccagcaaaaaccctattgaaataaattttgctcta
tgtgcgtcctcaagccacttgattccagatgaagttatcccactccttcttccatctctc
atatccaagacgacacatataaaggactttattcgtaaaaaagcattggcatctttacat
aaacttttgaaaagaaatcctgaattggcttgttctatagaaggtccaacaaggcggtgt
ttaattgatccaaatccaggtgtggttgccgtcgctattcaggtagctatggatttagtt
gaacaagtagatttgtttgacattttaccaggaatactcgatgttgcggaccaaattctt
gatgataaatttccaaatgagtttaaatataaaagtttgtctgctccttggatgttatgt
gatgcaattagtcttctttctcgtatcaataaaaaggaaactaataatgtatcctccaag
ttaagtgaacgctacgtacattttttgaaacgagtcataagtaaatcttttggatcaaaa
gaaatgatttcatgtgctattatatttgagtgcattaaagctatcagtatcttgatagat
aaaaacagtaaaaccgatttaataaccaaagcccttcctgccgtctccaaatttcttcaa
gacaaaagttctaatttgaagtatatgggtattgcttctatggaacttatattcatggac
acagatttggttctttcaactgaacaggagaatatcatatccagctgcttaagctatcct
gatgagagtattcgtcgtaaaacattgagtcttttgtatgttttggctcatgataagaat
gttcgacaaatctgtactactttacttagttatattaaggaatctgatgataaatacaaa
agaaaagagtttatcaccaaaacatctgatctagcagataaattcattgatagtcaaggc
atggattggtatattaatgtccttcttcgactttctcaactgtcaccctccgaaatgaga
tatgattttttatatcgaataaaaagtaccctagggtctaaatgctccaatccgaaggag
caatccagtattgggtcaaagttaaaatctattttgagtcgatttcttcttagtgatggc
gtaaagatatcaaaatcaattacaagtttgtatatatggtgttggtcacactttgatcct
aagtttgaagatttttcatccattattgaacttgctattaaagcagataatgaagaatca
gttatagacgctctttcctatatattcattcataatccaaccgtttgtttccccatggaa
gtacatgagtttataactaagtgtttagaaaatcaaaatgaaagaatcaaagacaaggct
agggaaatcaaatttctaattaaaattttagaaggagagacccttccaaaagtttctaca
ttagacgattttactctcactttccttgacaaatacattgtggagaaaattggaacaaag
caacaaaatccattcaataaaaaaaggtctccttaccatgaagctgtgataccttttgag
gatatcaatgtggataagtccaaattgaggctagcaccatataatgaactttcctctcta
aatccaaacaataatacagttttaaacacactagccgaagatgaattgtcggaagttgag
cactcgatatggtcttttgatgggtgtaaaaaagacgaaaacaacataatttcaaataaa
ttatctgactccatggaatctttttttgttgaagaaaagaatcagagctttggattggat
tctttattaaaagatgatcttttaacggctttggacgaggaatag
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