KEGG   Lepeophtheirus salmonis (salmon louse): 121117279
Entry
121117279         CDS       T08214                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
lsm  Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lsm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121117279
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lsm03041]
    121117279
   04121 Ubiquitin system [BR:lsm04121]
    121117279
Spliceosome [BR:lsm03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    121117279
Ubiquitin system [BR:lsm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121117279
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 121117279
NCBI-ProteinID: XP_040567590
LinkDB
Position
5:complement(28653297..28656532)
AA seq 946 aa
MKMSSYTEKVVRMRRREDDKEVMIEDTEEGEYSSRGEGSEEESEERRSHHHRKKSSKKHH
KKHHKKEKKKKKRRKRSSSRNPSLSPAKKISRKSSPDDTDHEGGDRASTPEIIDVDAIED
GEISSPESKMEVIPATAQNSSRSPPSILPPANNNSKSSHSKSLKRRRSPSFVEEQTTKGR
SKKENKSSNGENRHDKHLKSPEKRSKSPSKEDKDSFKESLSIEETNKLREKVGLKPLKVD
AKSESKSSSKDKQPSPTQAQKNESKDSLSVEETNRLRAEIGLKPLKVNNVENGATSAKTD
SHSEFSEFEVIPSSLKNERHRPPQNLAEISRTEKMRKKIQERREKRRQESKLLLVRGLGD
SDDEEDNYTSWVKKQGRLQKEKEAAAKRAKMLDELDDDFGVGDIIKEEFPKTRKINYNQK
DLKGLRVEHNVDNFSEGQSVILTLKDSDILDDTESDVLVNVNMMDDEKAKKKIEDAKKTK
TGYNPYDQEMVDDETGELKKKNLLDKYDEEIDGEAKKSFQIGSVNTLNRDKEKERIRDKL
NKNLVSLELPEKKIASDYYTPGEVVAFKKTKKKKKIKRRILKADDLINMMNNAPTESFGS
RNKTSGPKEIEDQDTGEIKDLSNVNICEEDKKEELSMAEKLRRKIKEKLNKKAKTDIGDI
LINETPMNNEEVYSSSGAELIGTFADDEKNSKNIILNETSEFCRNLGAWTSNYGSYEAKD
TSSSSVLEEFEDSLKSSSTKNREERWREMDMSCGEDDADTDKEDDKQKPDVESVTILDEE
PNLNVGVGSAIKMAVNKGYWESDVQTTSASNLKHLMSQNYFIEDKVRDDDRASRRQDRYG
GGPTVAFQEKKDYAPNIKLEYIDDSGRKLNSKEAFRYLSHRFHGKGSGKLKTEKRMKKSA
EESMMKNMSSTDTPLGTVEKMLRKQKETSTPYLVISGKNQHPDLRK
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgaaaatgagcagttacacagagaaggtggtccgaatgcggagaagagaggatgataag
gaggtgatgattgaggatactgaagagggagagtattcttctcgaggggaagggtctgag
gaggagtccgaagagcgacgctctcatcatcatcggaagaaatcatccaagaagcaccac
aaaaagcatcataaaaaggagaagaaaaagaaaaagaggaggaagcgatcttcttcacga
aacccttccctcagccctgctaagaagatcagtcgaaagtctagtcccgatgatacggac
catgaaggtggtgacagagcctctacaccggaaatcattgatgtggatgccattgaagat
ggggaaatttcaagtccagaatctaaaatggaagtgattcctgcaactgcccaaaactca
tctcgttcacctccttcaattctaccacctgcaaataacaatagtaaatcatctcatagc
aagagtttgaaacgtcgtcgatccccctcatttgtagaggaacagacgaccaaagggcgc
tctaaaaaagaaaacaaatcaagcaatggagagaatcgacatgataaacacctcaaaagt
cctgaaaaacgatccaagtcaccatctaaagaggataaagattcttttaaagagtcctta
agtattgaggaaacaaataaacttcgggaaaaagtgggtctcaaaccgttaaaggtagat
gcaaaatcagagtctaagagttcaagcaaggataaacaaccatctccgactcaagctcaa
aaaaatgaatctaaagattctttaagtgtagaagaaacgaatcgcttacgtgcagaaatt
ggattgaaacccctcaaagtcaataatgttgagaatggggccaccagtgctaagacagat
tctcattccgaattttcagagtttgaagttataccttctagtctcaaaaatgagcgtcat
agacctcctcagaaccttgctgaaatatctagaacggaaaaaatgcggaaaaaaatacaa
gaacgccgtgagaagaggcgtcaggagtcaaagttgctattagtaagaggtctgggagat
agtgacgatgaggaagataattatacatcctgggttaaaaagcaaggaagactccaaaaa
gaaaaagaggcagctgccaaaagagcaaagatgttggatgaactggatgatgattttgga
gtaggagatatcataaaagaagaatttcccaaaacacggaaaatcaactataaccaaaaa
gatttgaaaggacttcgagttgaacataacgttgacaatttttcagaagggcaatctgtt
atcctcacactaaaagactctgatattttagatgacactgaatctgacgttctagtaaac
gtgaacatgatggatgatgaaaaagctaaaaagaagattgaggatgctaaaaaaactaaa
acaggttacaatccttatgatcaggaaatggtcgacgatgaaactggagaattgaagaaa
aagaatcttttggataaatatgacgaggaaattgatggcgaggcgaaaaaatcctttcaa
atagggtctgtaaatacgttgaatagagataaagaaaaagaaaggatccgtgataaattg
aataaaaatctagtttcactcgagcttcctgagaagaaaattgcctcggattattacact
ccaggagaagttgttgcttttaaaaagactaaaaagaaaaaaaaaatcaaaagaaggata
ttgaaagctgatgatcttattaatatgatgaacaatgcaccaacagaatcatttggttcg
aggaataaaacgtctggtcctaaagaaattgaagatcaagatacgggcgagataaaagac
ttaagtaatgtaaatatttgtgaagaagataagaaggaagaactctctatggccgaaaaa
cttagacgtaaaattaaagaaaaactgaataagaaagcaaaaacggatattggagacatt
ttaatcaatgaaactcctatgaataatgaagaggtttactcatcttctggagctgaactt
attggtacatttgctgatgacgaaaaaaattctaaaaatattatattaaatgaaacatca
gagttttgtcgtaatctgggtgcgtggacgtcgaattatggttcttatgaggctaaagat
acaagtagttctagtgtattagaagaatttgaagattccttgaagagtagttcaacaaaa
aatagagaggagagatggagagaaatggatatgtcctgcggagaggatgacgctgacaca
gacaaagaagatgataagcaaaaacctgatgtggagtcggttactattttagacgaggag
cctaatttaaatgtcggcgtgggatctgctatcaaaatggctgtcaacaaagggtattgg
gaatctgatgttcaaacaacatctgcttctaatttaaaacatctcatgtcccaaaactat
tttattgaagataaggttcgagacgacgaccgagcctcacggagacaggatcgatatgga
ggtggtcctactgttgctttccaagagaagaaagattatgcaccaaatatcaaattagag
tatatcgatgattcgggtaggaaactaaattccaaggaagcattccgatacttgagtcat
cgatttcatggtaaagggtctggtaagctaaaaactgaaaagcgaatgaaaaaatccgca
gaggagagtatgatgaaaaatatgtctagcacggatactcctttaggtactgttgagaaa
atgttaagaaaacaaaaagaaacatcaactccttatttagttatttctgggaaaaatcag
catccagatttgaggaaataa

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