KEGG   Lepeophtheirus salmonis (salmon louse): 121117362
Entry
121117362         CDS       T08214                                 
Symbol
Wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
lsm  Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lsm00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    121117362 (Wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsm03019]
    121117362 (Wdr82)
   03036 Chromosome and associated proteins [BR:lsm03036]
    121117362 (Wdr82)
Messenger RNA biogenesis [BR:lsm03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     121117362 (Wdr82)
Chromosome and associated proteins [BR:lsm03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     121117362 (Wdr82)
    COMPASS/SET1 complex (yeast)
     121117362 (Wdr82)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WDR55 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_EML WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_NOL10_N Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st DSE1_N Beta-prop_SPT8 Beta-prop_Aladin CFAP251_N Beta-prop_WDR75_1st WD_LRWD1 Beta-prop_RIG_2nd WD40_RFWD3 PAC11 PROPPIN Beta-prop_VPS8 TRM82_WD Beta-prop_Vps41 Beta-prop_WDR41 Tricorn_2nd Beta-prop_ACSF4 RMC1_N Beta-prop_HPS5 eIF2A MinC_C MIOS_WD40
Other DBs
NCBI-GeneID: 121117362
NCBI-ProteinID: XP_040567699
UniProt: C1BT31
LinkDB
Position
5:complement(22845164..22848008)
AA seq 319 aa
MMKLVDNVIRSMRVGKVFRENSEGINNLHFSSDGSWLISSADDDQIVIYDCEKGVTRRSL
NSKKYGVDLVHFTPGHYSKSHVVHASTKENDIIRYLNVAENKYISYFRGHTKKVVTLCVS
PVDESFISGSLDKTIRLWDLRSNNCQGLMHLAGRPVASFDPEGLIFAAGISSESVKLYDL
RSFDKGPFSSFKFPPEKEMEWTGLKFSPDGKTILISTNGSLIKLIDAFSGQTLQTFTGHL
NTKGIPLEASFSPDSQFVISGSTDGRVHIWNAETGTKVCVLNGDHDGPVSCVQFNPKYMM
MASACNNMAFWLPSIEEET
NT seq 960 nt   +upstreamnt  +downstreamnt
atgatgaaattagtggataatgtgattcgttctatgcgagttggaaaagtctttagagag
aattcagaaggcatcaataatttgcatttctcttctgacggctcctggctcatatcgagt
gcggatgacgatcaaatcgttatttatgactgtgaaaaaggagtgactcgaaggagtctt
aactccaaaaagtatggtgttgatctcgttcatttcacacctggacattactccaagagc
catgttgttcatgcatctaccaaagaaaatgacatcatacgatacttgaatgtcgctgaa
aataaatacatctcctattttaggggtcatactaaaaaagtagtaacactctgcgtaagc
cctgtcgacgagtcctttatctcaggatccctagataagacaataagattatgggacttg
cgatccaacaactgccaaggcttgatgcaccttgcaggaagaccggtggcatcatttgat
cctgaaggtctaatattcgcagctggtatcagttcagagagtgttaagctctacgatctt
cgctcatttgataaagggccattttcatccttcaaatttccacctgagaaagaaatggag
tggacagggttaaagtttagtcctgatggtaaaacgattctcatttcaactaatggatcc
ctcataaaacttattgatgctttctccggacaaacgcttcaaactttcactggtcattta
aatacaaaaggaattccgttagaagcttcattctcaccagactctcaattcgttatttct
ggatccacagatggacgtgttcatatttggaatgcagaaacgggtacaaaagtctgcgtt
ttaaatggagatcacgatggacctgtcagttgcgtacaatttaatcccaagtatatgatg
atggcatctgcttgtaataatatggcattttggttacccagtattgaagaagagacttga

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