Lepeophtheirus salmonis (salmon louse): 121117362
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Entry
121117362 CDS
T08214
Symbol
Wdr82
Name
(RefSeq) WD repeat-containing protein 82
KO
K14962
COMPASS component SWD2
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121117362 (Wdr82)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121117362 (Wdr82)
03036 Chromosome and associated proteins [BR:
lsm03036
]
121117362 (Wdr82)
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
121117362 (Wdr82)
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
121117362 (Wdr82)
COMPASS/SET1 complex (yeast)
121117362 (Wdr82)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WDR55
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_NOL10_N
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
DSE1_N
Beta-prop_SPT8
Beta-prop_Aladin
CFAP251_N
Beta-prop_WDR75_1st
WD_LRWD1
Beta-prop_RIG_2nd
WD40_RFWD3
PAC11
PROPPIN
Beta-prop_VPS8
TRM82_WD
Beta-prop_Vps41
Beta-prop_WDR41
Tricorn_2nd
Beta-prop_ACSF4
RMC1_N
Beta-prop_HPS5
eIF2A
MinC_C
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
121117362
NCBI-ProteinID:
XP_040567699
UniProt:
C1BT31
LinkDB
All DBs
Position
5:complement(22845164..22848008)
Genome browser
AA seq
319 aa
AA seq
DB search
MMKLVDNVIRSMRVGKVFRENSEGINNLHFSSDGSWLISSADDDQIVIYDCEKGVTRRSL
NSKKYGVDLVHFTPGHYSKSHVVHASTKENDIIRYLNVAENKYISYFRGHTKKVVTLCVS
PVDESFISGSLDKTIRLWDLRSNNCQGLMHLAGRPVASFDPEGLIFAAGISSESVKLYDL
RSFDKGPFSSFKFPPEKEMEWTGLKFSPDGKTILISTNGSLIKLIDAFSGQTLQTFTGHL
NTKGIPLEASFSPDSQFVISGSTDGRVHIWNAETGTKVCVLNGDHDGPVSCVQFNPKYMM
MASACNNMAFWLPSIEEET
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaattagtggataatgtgattcgttctatgcgagttggaaaagtctttagagag
aattcagaaggcatcaataatttgcatttctcttctgacggctcctggctcatatcgagt
gcggatgacgatcaaatcgttatttatgactgtgaaaaaggagtgactcgaaggagtctt
aactccaaaaagtatggtgttgatctcgttcatttcacacctggacattactccaagagc
catgttgttcatgcatctaccaaagaaaatgacatcatacgatacttgaatgtcgctgaa
aataaatacatctcctattttaggggtcatactaaaaaagtagtaacactctgcgtaagc
cctgtcgacgagtcctttatctcaggatccctagataagacaataagattatgggacttg
cgatccaacaactgccaaggcttgatgcaccttgcaggaagaccggtggcatcatttgat
cctgaaggtctaatattcgcagctggtatcagttcagagagtgttaagctctacgatctt
cgctcatttgataaagggccattttcatccttcaaatttccacctgagaaagaaatggag
tggacagggttaaagtttagtcctgatggtaaaacgattctcatttcaactaatggatcc
ctcataaaacttattgatgctttctccggacaaacgcttcaaactttcactggtcattta
aatacaaaaggaattccgttagaagcttcattctcaccagactctcaattcgttatttct
ggatccacagatggacgtgttcatatttggaatgcagaaacgggtacaaaagtctgcgtt
ttaaatggagatcacgatggacctgtcagttgcgtacaatttaatcccaagtatatgatg
atggcatctgcttgtaataatatggcattttggttacccagtattgaagaagagacttga
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