Lepeophtheirus salmonis (salmon louse): 121117364
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Entry
121117364 CDS
T08214
Symbol
Cul4
Name
(RefSeq) cullin-4A
KO
K10609
cullin 4
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03420
Nucleotide excision repair
lsm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121117364 (Cul4)
09124 Replication and repair
03420 Nucleotide excision repair
121117364 (Cul4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121117364 (Cul4)
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121117364 (Cul4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsm04147
]
121117364 (Cul4)
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
121117364 (Cul4)
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
121117364 (Cul4)
TCR (transcription coupled repair) factors
Cul4-CSA complex
121117364 (Cul4)
Exosome [BR:
lsm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121117364 (Cul4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Ribosomal_L36
Motif
Other DBs
NCBI-GeneID:
121117364
NCBI-ProteinID:
XP_040567702
UniProt:
A0A0K2U0R3
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Position
5:complement(37838554..37841999)
Genome browser
AA seq
790 aa
AA seq
DB search
MHHHQSSAVNGRKREILVSSPPSNQQEKKRLKMDSKGVQQQQPNFSCLYNGANGGSKNLG
GGNQATARKLVIKNLKAQPTLPSDFVSKSLEKLRRATLAIQTSEPIRDATLEELYQAVET
LCAHDAAQRVYADLKALVEAHVETVREFLTPGGESLDKLIFMKKMNASWTSHCRQMIMTR
SIFLFLDRTYVLQNPSVLSIWEMGLDTFRRYVLTHPAVQTRTVDGILMLIEQERHGDMVD
RSLLKSLLRMLSDLQIYKEAFEKKFLVATEKLYSAEGRKLVNERDVPEYLSHVEKRLKEE
NERFIHYLDISTKWQLIHTVEKQLISEHMTTILTKGLDTLLEENRKVELRLMYSLLGRVK
GGCIELKAKMCEFVKKRGKVLVVNPEKDKTMVQELLDFKDKLDTIMSECFTGNDQFVVGM
KEAFETFINIRQNKPAELIAKFVDSKLKAGNKEASEEELEKLLDKIMVIFRFIHGKDVFE
AFYKKDLAKRLLVGKSASVDSEKSMLSKLKAECGAGFTSKLEGMFKDMELSRDINIAYRQ
HLEGLKSANNKIDMTVNVLSMAYWPTYQPMEVTMPSEMAKYQELFKKFYHAKYSGRKLQW
QPNLGHAVLKANFKSGHKELRVSLFQTLVLLLFNYADELPFAEIKVSSNIEDGELRRTLQ
SLACGKIRVLKKLPKGKDVMDADKFYFNKEFTHQLCHIKINQVQMKETNDEQKATEERVF
QDRQYQIDAAVVRIMKMRKTIFHNLLITELYNQLKFPVKPPDLKKRIESLIDRDYMERDK
DNTNQYNYVA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatcaccagagctcggctgtaaatggtcgtaagcgtgaaatccttgtaagttct
cctccgtcgaatcaacaggaaaagaaacgtttgaaaatggattccaagggtgttcagcaa
caacagcccaacttcagttgcctctacaatggtgcaaacggtggttccaagaatctagga
ggagggaatcaggcaacggccaggaagctggtgatcaagaacctgaaggcccaacccacg
ctgccttcggacttcgtgagcaagtcacttgagaagctacgtcgagccacacttgccatc
cagacttctgagcccattcgagatgccaccttggaagagctctatcaagcagtggagact
ctttgtgcacatgatgcggcgcaaagagtgtacgccgatctcaaagctctggttgaagct
cacgtggagacagtgagagaattcctgactcctgggggagagtctctagataaactgatt
ttcatgaaaaaaatgaatgcgagttggacctctcattgccgacaaatgattatgacgcgc
tccatctttctcttcctcgaccgtacctacgttcttcaaaacccaagtgttttgtccatt
tgggaaatggggctagacacttttcgacgctatgttctaactcatcctgccgtacaaacg
cgtactgttgatgggattctaatgttgattgaacaagagagacacggagatatggtggac
agaagtttgctcaagtctttacttcgcatgctcagtgatttgcaaatttataaggaggcg
tttgaaaaaaagtttttggtagcgacagagaagctttattctgcagaaggaagaaaacta
gtaaatgaaagagatgttcctgagtacttgagccacgttgaaaaacgtttgaaagaagaa
aatgagagatttattcattatcttgatataagtacaaaatggcaattaatccatacagtc
gaaaagcaacttatttcggaacatatgactaccattctcacaaaaggcttagacactctt
ttagaagagaatcgtaaggtagagttgagattaatgtattcgcttttaggtcgtgttaaa
ggtggttgtatcgaacttaaagctaaaatgtgtgaatttgtcaaaaagcgcggtaaagtt
ctagttgtcaatcctgaaaaagataagactatggttcaagagttacttgattttaaagat
aaattggatacaattatgtcggaatgctttactggaaacgatcaatttgttgttggaatg
aaagaagctttcgaaactttcattaatattcgtcagaataaaccagctgaacttattgct
aaatttgttgattctaagctcaaagcggggaataaagaagcttctgaagaggaacttgaa
aaacttttagacaaaatcatggtcatatttaggtttattcatggaaaggatgtgtttgaa
gcattttataaaaaagatctagctaaacgtttattggtaggaaaatctgcttctgtagat
tcggaaaaatccatgttgtcaaagctgaaagctgagtgtggtgcgggctttacttcaaaa
cttgaaggaatgttcaaggacatggaacttagtagagacattaacattgcttatagacaa
catttggagggacttaaatctgcaaataacaaaatagatatgacagtcaatgttttaagt
atggcttattggcctacatatcaacctatggaggtaacgatgccttcagagatggctaag
tatcaagaattgttcaagaaattttatcacgccaaatattctggaagaaagttgcagtgg
caaccaaatctagggcatgccgtgctcaaagctaattttaaatctggccataaggaattg
cgagtctctctttttcagaccctagttctactattatttaactatgctgatgaattacct
tttgcagaaataaaagtgtcatcaaacattgaagatggagagttaaggagaacattacaa
tcccttgcttgtggaaaaattcgcgtactaaaaaagttacctaaaggaaaagatgtgatg
gatgctgataaattctatttcaacaaagaattcactcatcaactctgccatattaaaatc
aatcaagttcaaatgaaagaaacgaatgatgaacagaaggcaactgaggaacgggtcttc
caagataggcaatatcaaatagacgctgcagtcgtgcgtattatgaaaatgagaaaaact
atatttcacaatcttctcattactgagctgtataatcaactcaaattcccagttaaacct
ccagacctaaagaaaagaattgaatctctgattgatagggattacatggaaagagataaa
gataataccaatcaatataattatgttgcttaa
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