Lepeophtheirus salmonis (salmon louse): 121117416
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Entry
121117416 CDS
T08214
Symbol
RIOK1
Name
(RefSeq) serine/threonine-protein kinase RIO1
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121117416 (RIOK1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lsm01001
]
121117416 (RIOK1)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsm03009
]
121117416 (RIOK1)
Enzymes [BR:
lsm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121117416 (RIOK1)
Protein kinases [BR:
lsm01001
]
Serine/threonine kinases: Other
RIO family [OT]
121117416 (RIOK1)
Ribosome biogenesis [BR:
lsm03009
]
Eukaryotic type
Pre-40S particles
Kinases
121117416 (RIOK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
TCAD9
Motif
Other DBs
NCBI-GeneID:
121117416
NCBI-ProteinID:
XP_040567773
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All DBs
Position
5:27557937..27560600
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AA seq
534 aa
AA seq
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MSIMDGQFSDAEDDFKEDESIRIELSSLKMNNGKEAYPAPIASSSSTPTYSSHDEDDFDF
DEEENEDHWDEKGRLIVSRAPNSQSMSNKVSKFQPADKILYKYVDKINVEKYAGPKLIGS
AVSNLLEHTKQADKERVRLKDKADRATMEQVLDPRTRMIIFKFLNRGLITEINGCISTGK
EANVYHCTDKTVVDKAVKIYKTSILVFKDRDKYVTGEFRFRKGYGKKNPRKMVRTWAEKE
MRNLTRLYNAGIPCPEPILLRSHVLLMSFIGSEGWPAPRLHDVDISESKARELYWDLSLI
VRKIYQLCKLVHGDLSEYNLLYHEGKVYVIDVSQSVEHEHPHALEFLRKDITNINDFFRR
QKVNVLSVKELFDFVVDPLISGKEEFVLEELDAKASSRTEEEQTAQDLMDEEVFKRIFIP
RRLNEVDKPEREISRAKNGQGDEPSYQSVTGIRVRRGSDECVSSSGDTDSDDENSSPEDE
DKIPFRSSRRPRIESPDSKKERKKAVKDSHAEKRKCKVKKHIKKRKEKVGSKKK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcatggacggacaatttagcgatgcagaagacgatttcaaggaagacgagagc
ataaggattgagttgtcgtctctgaagatgaacaatgggaaggaggcctaccctgctcct
atcgcctcttcatcatctacgcccacttattcatcccatgacgaagacgacttcgacttt
gatgaggaagaaaatgaggatcattgggatgaaaagggcagactcattgtttccagagct
cccaattcccaatccatgagcaataaagtttccaaattccaaccagctgacaagattctc
tataaatatgtagataaaattaatgtggaaaaatatgcaggaccaaaactaatcgggtca
gccgtctcaaatctccttgagcatacgaagcaggcagataaagaaagagtacggctcaaa
gataaagctgacagagcaacaatggagcaagtattggatcctcgaacccgaatgattatt
ttcaaatttttgaacagaggtctcataacagaaatcaatggatgcatctctactggtaaa
gaggcaaatgtatatcattgtacagataaaactgtggttgacaaagccgtaaagatatac
aagacttcaattctagtttttaaagatcgagacaaatatgttacaggagaatttcgattc
agaaaaggatatgggaaaaaaaatccacgaaaaatggttagaacttgggcggaaaaagaa
atgaggaatctaacaaggctatacaatgctgggattccgtgccctgaaccaattttactt
cggtcccatgttttacttatgagcttcattggctcagagggatggcctgcgcccagattg
catgatgttgatatatcagagtcaaaggctagagagctctattgggatttatccctcatt
gtcagaaaaatttatcaattgtgcaaattagttcatggggatttaagtgaatacaacttg
ctttatcatgaaggtaaagtctacgtcattgatgtttctcaatctgttgaacatgaacat
cctcatgctctagaatttctgaggaaggatattaccaacatcaacgatttttttcgtcgc
caaaaagtgaatgtactcagcgtcaaagaactttttgatttcgtcgttgatcccttgatt
agtggaaaggaggaatttgttttggaagaactagatgctaaagcatcttctcgtacagag
gaagaacaaactgcccaagatttaatggatgaagaagtttttaaacgtatatttatcccc
aggcgattgaatgaagtggataaacctgagcgggaaatatctagagctaaaaatggacag
ggtgatgaaccttcataccaatcggttactggtatccgagttagacgtggaagtgacgaa
tgtgtctcatcttcaggtgatacagactcagatgacgaaaacagttcacctgaagatgag
gataagatcccatttcgaagtagtcgtcgtcctaggattgaatctccggatagtaaaaaa
gagcggaaaaaggccgttaaggattcacatgctgaaaaaaggaaatgcaaggtgaagaaa
cacatcaagaaaaggaaggaaaaagtgggatcaaagaaaaaataa
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