Lepeophtheirus salmonis (salmon louse): 121117468
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Entry
121117468 CDS
T08214
Symbol
Pcif1
Name
(RefSeq) mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase
KO
K17584
phosphorylated CTD-interacting factor 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsm01009
]
121117468 (Pcif1)
Protein phosphatases and associated proteins [BR:
lsm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121117468 (Pcif1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCIF1_WW
WW
DUF842
At4g37920_C
Motif
Other DBs
NCBI-GeneID:
121117468
NCBI-ProteinID:
XP_040567845
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All DBs
Position
5:31590597..31595130
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AA seq
689 aa
AA seq
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MSSTTSANVEATCSRGAPVPHSINNFETDLPGDLLSQGWRKFWSRRENRPYFFNRLTGDT
MWEMPPSPGSGTGGAGYNSADPLGISAGDPQAQPPPTPNNNGGGNVVNTNNKRRISSCEE
QGPPLKKLILNGPWDLEIPTNVILFEKAPSMIPHPHPEAEALRFVLVMKLRQSLEEICRS
REGIDAPKDCFNRWLLERKVIDQGGDPVLPSYCFPEISMSMYREIMNDIPMKLVRPSMNA
EARKQLSKYCEAAKKLMEMRNAPPESRKIVKWNVEDNLAWLRRVVGANFEDFQERLQHLK
TQCQPHITEAAKSSVEGICKKIYTLSTDYALKVKEKNAEILKEANISEHGIKTSVPNEHK
VWCYPVQFALPCPRLPQVDFFQDREQTVLRYKNDSLGINNSHFNKLEQLYRYGCADDRKF
EYFLVRVWMLLKRYNSYFGTNQGEGAQNQGAIPITVLECLNKQFGVTFECFASPLNCYFR
QYCSAFPDIDSYFGSRGPVMDFKPLCGSFEANPPFCEELLDTTFNHFDRLLEESLEPLSF
IVFLPEWRDPPPQALIKLESSRWKRRQIIIPALEHEYRHGFQHSLPKADVNIRSENSTLM
VWLQNDAGFQRWGPTEDRIEALRESFRPGQERERDKAQLLSPTRSNNESTIVSTPSTTVS
SVVQAPTTPTTQPPMSPNMMLPSNNSAPS
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgacgactagtgcaaatgtggaggcaacctgctctagaggggctcccgtcccc
cactccattaataatttcgaaacggatcttcctggggatttactaagtcagggatggcgc
aagttttggagccgccgagaaaatcgtccctatttcttcaaccgcttaacgggagacacg
atgtgggaaatgcctcccagccctggaagtggaacgggaggagcaggctataactccgca
gatcctctgggcatcagtgcgggggatcctcaggctcagccccctccaacccctaacaac
aacggtggcggcaacgtcgtcaacaccaataataagagacggatatcttcgtgtgaagag
cagggacctcctcttaaaaaacttatcctcaatggtccttgggatctggagatacccacc
aacgtcattttattcgagaaagctccttccatgatccctcatcctcatccggaggcagaa
gcactgcgatttgtccttgttatgaaactaaggcaaagcttagaagaaatttgccgctct
cgagaaggcattgatgctcctaaagactgtttcaatcgctggcttctcgaaagaaaagtt
attgatcagggtggggatcctgttttaccttcttattgctttccagagatctctatgtct
atgtatagggagataatgaacgatataccaatgaaattagttcgtccttctatgaatgct
gaagctcgaaaacaactctcaaagtattgtgaagctgctaaaaagttgatggaaatgcga
aatgcacctcctgaaagtagaaaaatagtaaaatggaatgttgaggataatttagcgtgg
ttaagacgggttgttggcgctaattttgaagattttcaagaaagactccaacatctcaaa
acacaatgtcaaccgcatataaccgaagctgcgaaaagctcagttgaaggaatttgtaaa
aaaatatatactctctctactgactatgccttaaaagtgaaggaaaaaaatgcagaaata
ttgaaggaagcaaatatttcagagcatggcatcaaaacaagcgtcccaaatgaacataaa
gtatggtgttaccccgttcagtttgctcttccctgccccagacttcctcaagttgatttc
tttcaagatcgagagcaaacagtacttagatataaaaatgattctttaggaattaataat
tcacactttaacaaattggaacaactgtatcgatatggttgtgctgatgacagaaaattt
gaatactttttagttcgtgtgtggatgttacttaagcgctataattcatattttggcact
aatcaaggagagggagctcaaaatcaaggagctattcctataacagtgttagagtgttta
aataaacaatttggtgtaacttttgagtgttttgcatcacctttaaattgttattttcga
cagtattgctctgcgtttccggatattgattcatattttggatctagaggccctgtcatg
gattttaagccactctgtgggtctttcgaagcaaatcctcccttttgcgaagaacttttg
gacactactttcaaccattttgaccgcttactcgaagaatctttagaacctctttcattt
attgttttcttgccggaatggcgagatccaccaccacaagcacttataaagcttgaatca
tcccgttggaaaaggaggcagattatcatccctgccttagaacatgaatatagacatgga
tttcaacattctttgcccaaagcggacgtaaacattagatctgaaaatagtacactcatg
gtatggcttcaaaacgacgccggattccaaagatggggacctacagaggatagaatagaa
gctctgagagaatcctttagaccgggccaagaaagggaaagggacaaggcccaattatta
tcccctacaagatcaaataacgaaagtacaattgtttcaactccatctaccaccgtttct
tctgtcgtacaagctccaactactccaacaacgcaacctccaatgtctccaaatatgatg
cttccttcaaataactcagcaccttcgtag
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