Lepeophtheirus salmonis (salmon louse): 121117683
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Entry
121117683 CDS
T08214
Symbol
LpR1
Name
(RefSeq) low-density lipoprotein receptor-related protein 8 isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121117683 (LpR1)
Membrane trafficking [BR:
lsm04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
121117683 (LpR1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF_3
PLDc
Motif
Other DBs
NCBI-GeneID:
121117683
NCBI-ProteinID:
XP_040568074
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All DBs
Position
5:15877845..15995510
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AA seq
952 aa
AA seq
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MIRFSTYLLFFHVFIYETGVSQGSHCLTTKFECDNKQCIPQSWRCNGLDDCMDNSDEVNC
IVKSNCTDSEFRCDEIRCVPKNWQCDGGEDCIDGSDENEDICSNQTCGAEQWRCLNANGT
KCIPLSWLCDGHNDCGDHSDEEDICNRTCISNEFTCDNSKCIQNRWVCDQEDDCGDGSDE
KSCPDMSCNADNEFSCGDGYCIKKYWRCDGDVDCPDASDERDCPEISSSGNFSDENIIVK
CKDTEFQCLSRNHCIHRTWLCDKDTDCPDGSDESVQQCGTRNKCRTDQFKCVNGDCIPGH
LQCSGAPECIDNSDEENCNFANGESSLGCDADKEFDCVGDGRMCVPLEQVCDKMNNCGNW
ADESHEKCNINECKTNNGGCDQTCIDLPIGYKCGCKSGYHLTSNHTCEDVDDCLTPGTCS
QICYNRPGTFKCDCLEGYSRDLRDSTRCKANEGHPSLLFAHKVDIRKISLDRNDMTSIVN
STRSSCALDFVFRTGMIFWSDEVTQKIYKAPIDEGNKKEVVVDHNIVIADGLACDWIYNH
IYWTDTGTNSINLAEFDGRLISTIIVDDLEEPRSIALHPAKGWMFWSDWGEDPKIERAGM
DGSHRETIISETLRWPNGITLDLVLDKLYWIDAKLNIVGSSDLDGSNSRVVYYSKQNLKH
PFSISIFEDWMYWTDWERKAIFRANKFNGKDVEPLSSLHLKQVPMVIHVYHPYRQKDSIN
HCLPLNGRCSHVCVPAPQFTKDSAKTACVCPNGLRLSHDNLNCVHDPNYVPHRDSRLFKL
SEKSRFNDSFHLSKYFNHNEYYLGPRSSLNETYKKSEKNSQVVSPLPNGNNETAGFMAGV
AIGIGAGVILLLFLVLMAIYRCFWYKSLQSINFDNPVYRKASEEGNGSRGGRNSSSPGAA
LLGMTIEREQSSFPQRNLTTLTLSSDISEATEIQPLNSNDTHMCSSEEVINS
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgatacgtttctcaacatatttattattcttccacgttttcatttatgaaaccggcgtg
tctcaagggtcacattgtttgacaaccaaatttgaatgtgacaataagcaatgtattcca
caatcctggagatgtaacggactggatgattgtatggataactcagatgaagtgaattgt
attgttaagagtaattgcacagactccgaatttcgatgtgatgaaatccgttgcgttcca
aaaaattggcagtgtgatggtggagaagactgtattgatggaagtgatgaaaatgaggat
atttgctcaaatcaaacatgcggtgctgagcagtggaggtgtctcaatgcgaatggtaca
aaatgtattcctttgtcatggttatgcgatgggcataatgactgcggggatcattcagat
gaggaggatatttgcaatcgtacgtgcatatccaatgaattcacatgtgacaacagcaaa
tgcattcaaaatcgttgggtttgtgatcaagaggatgattgtggagacggaagtgacgaa
aagtcgtgtccggatatgagttgtaatgcggataacgagttttcatgtggagatggatat
tgcataaaaaagtattggagatgtgatggggatgtggattgtcccgatgcatccgatgag
cgggactgtcccgaaatcagttccagtggtaatttcagtgatgagaacattattgttaaa
tgtaaggacacagagtttcaatgtttgagtcgtaatcactgcatacatcgaacctggctc
tgcgacaaggacacagattgtccagacggctctgacgaatctgttcaacaatgtggtaca
cggaacaaatgtcgaactgatcaatttaaatgtgttaatggggactgtatacctgggcat
ttacagtgctcaggagcgcctgaatgcattgacaattcggatgaggagaactgcaacttt
gcgaatggagagtcctcccttggatgtgatgcagataaagaatttgactgtgtaggtgat
ggtcgaatgtgtgtccccttggaacaggtatgtgataaaatgaataattgtggaaactgg
gcggatgagtcacatgagaagtgtaatatcaacgaatgtaaaaccaataatggaggatgt
gatcagacgtgtatagacttaccaattggatacaaatgtggttgcaaatccggatatcat
ctaacttcaaatcatacatgtgaagacgtggatgactgcctaacgcctggaacatgctca
caaatctgctacaatcgtcctggaaccttcaaatgcgattgcttagaaggatattctaga
gatcttcgtgattctactcgttgtaaagccaatgaagggcatccatctcttctgtttgca
cataaagtggatattcgtaaaatatctctggatcgtaatgatatgacctccattgtcaac
tcaactcgaagctcgtgtgcattggactttgtttttagaacgggaatgattttttggtca
gatgaagtcacgcagaaaatatataaagcacccattgatgaaggtaataagaaagaagtt
gttgtggaccacaacattgtcatagcggatggtcttgcatgcgactggatctataatcac
atctattggacagatacgggaacaaattcaattaatctagccgaatttgacggacgtctc
atttccaccatcatcgttgatgatttggaagagccacgatccattgcattacatcctgct
aaaggctggatgttttggtcggattggggtgaggatccaaaaattgagagagcaggtatg
gatggatctcatcgagagacgatcattagtgaaacattgcgttggcccaatgggattaca
ttggacctcgttctggataagctctattggatcgatgcaaaacttaatattgtgggttca
tcagatttagacggatcgaatagtcgtgttgtatattactcgaaacagaatttgaagcat
ccttttagtataagtatctttgaagactggatgtattggacagactgggagcggaaggct
atttttagagctaataaatttaatggaaaggacgtagaaccactttcgtcactccattta
aagcaagtcccaatggtcatccacgtctatcatccatacaggcaaaaggattccattaat
cactgtcttcctctcaatggtcgttgttcgcatgtttgtgttcctgcaccacagttcact
aaagattcggcaaagactgcttgtgtatgtccaaacggacttagactatcacatgataat
ttgaattgcgtccatgatcccaattatgttcctcatcgtgattctcgcctgtttaagctt
tctgaaaagagtcgatttaatgactcctttcatctttccaaatattttaatcataatgaa
tactatttaggtccaagatcatctctcaatgaaacttataaaaagtctgaaaaaaattcg
caggtggtctcccccctgccaaatgggaataacgagactgccggattcatggctggagta
gctatcggtattggggctggcgtcatactcttacttttcctagtactcatggcgatctat
cgttgtttttggtacaaatctcttcaatcaatcaactttgataaccctgtatatcgcaag
gcatcagaagaaggcaatggatctcgtggaggtcgaaactcttcatcgccaggggctgca
cttttggggatgactatagaaagagaacaaagctcttttccgcaaaggaatctgacgaca
ctaacactgagttcggacatatcagaggcgacagaaatacaacccttaaatagtaacgac
acacacatgtgttcatcagaggaggtcatcaattcgtga
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