Lepeophtheirus salmonis (salmon louse): 121117761 Help Entry 121117761         CDS       T08214                                  Symbol Prp19 Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism lsm  Lepeophtheirus salmonis (salmon louse) Pathway lsm03040   Spliceosome lsm04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:lsm00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     121117761 (Prp19)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     121117761 (Prp19)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:lsm03041]     121117761 (Prp19)    04121 Ubiquitin system [BR:lsm04121]     121117761 (Prp19)    03400 DNA repair and recombination proteins [BR:lsm03400]     121117761 (Prp19) Enzymes [BR:lsm01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      121117761 (Prp19) Spliceosome [BR:lsm03041]  Complex B   Other components    Prp19 complex     121117761 (Prp19)  Complex C    Prp19-CDC5 complex     121117761 (Prp19) Ubiquitin system [BR:lsm04121]  Ubiquitin ligases (E3)   U-box type E3    121117761 (Prp19) DNA repair and recombination proteins [BR:lsm03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     121117761 (Prp19) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_WDHD1_1st Prp19 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WD40_Gbeta EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_HPS5 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_WDR19_1st U-box WD40_RFWD3 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_Nup120_160 PROPPIN Beta-prop_DCAF12 Cytochrom_D1 Beta-prop_ACSF4 Tricorn_2nd Beta-prop_VPS8 Beta-prop_WDR35_TULP_N B-prop_COPA_B_2nd ATG16 PAS_11 Herpes_UL25 Motif Other DBs NCBI-GeneID:  121117761 NCBI-ProteinID:  XP_040568185 LinkDB All DBs Position 5:63955872..63957812 Genome browser AA seq 513 aa AA seqDB search MTTFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSKDPLSVEELIAIKAS PLVKPKPPSGTSIPAILKSLQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIA RLTKEVTAAREALATLKPQAAIPSAPATPATPSAPEPSIVSEALEPVGMNKDIIDKLQDK ATILTQERKKRGKMVPEDLVSGEDIRGSFRTLASHPGLHSASAPGILSLDVNANDTSKIL TGGADRSATVFNKDTEQIVANLKGHSKKISRVIYHPSSDDTVITASHDTTVRVWHVPSSQ TLKILRIHDGPVTGLSLHATGDYILSTSTDRYWAFTDLRSGRLITKVTADSSAGGASSSV ALTCAQFHPDGLIFGTGTSDSEIKIWDLKEQQNVANFPGHNGSITALSFSENGYYLATAA DDACVKLWDLRKLKNFKTIALEDGYEVRDLCFDQSGTYLAVAGTDVRIYQCKQWQELRVF NDHTAMATGVRFGKHANYVASTSMDRTLKLYGL NT seq 1542 nt NT seq  +upstreamnt  +downstreamnt atgacgactttcatttgttccataagtaatgagagccctgaggtgcccgtcatcagcccc aagtctggactggtctacgacaagcggctgattgagaaggtgttggaaagcaatggtgga gtggatcccgtgtccaaggatcctctgagtgtggaggagctgattgccattaaagcgagt ccgcttgtgaagcccaagcctccctcgggcacgtccattcccgcaattttgaagtctctg caggacgagtgggacgccgtgatgctgcactccttcaccctccggcagcagcttcaaacg gcgcgccaagagctgagtcatgccctctatcagcacgatgcggcttgtcgggtcatcgct cgcctcacgaaggaagtcactgcggctagagaagctttggccacactgaagcctcaagct gcaatcccctccgctcctgctacacctgccacaccctctgcccctgagccttccattgtg tcggaagcattggaacctgtgggaatgaacaaggacatcattgacaaactacaagataaa gccacgatcctcactcaagaacgtaagaagagagggaaaatggttccagaagatttggtg tctggtgaagatatacgaggtagcttccgtacccttgcatcccatcctggtctacacagt gcctctgctcctggtattttgtctctggatgtcaatgctaatgatacaagtaaaatcctt actggaggtgcagatagaagtgccactgtttttaacaaagacacggagcaaattgttgcc aatctcaaaggacactctaaaaagatatcaagagtcatatatcatccatcttcagacgac actgtcattaccgcttctcatgatacaactgttcgtgtctggcatgtgccttcttctcaa acccttaaaattttacgaattcacgatggacccgtcactggattatctcttcacgctacg ggtgactatatcttgtccacatccacggatcgctattgggcattcactgacttgcgaagc ggtcgacttataactaaagtcacagctgattcatcggccggaggagcttcttcctctgtt gcactgacttgtgcacaattccatcctgatggtctcatttttggcactggcacatcagat tcagaaattaagatttgggatctgaaagaacaacaaaacgtagctaacttccctggacat aatggttcaatcactgcgctttcgttttctgaaaatggttactatttggctactgctgca gatgatgcttgtgtaaaattgtgggatttgcgtaaattgaagaacttcaaaacaattgca ttggaagatggttacgaagtacgagatctatgttttgatcaaagtggtacctatttggca gttgctggtactgatgttcgtatttaccaatgcaagcaatggcaagaacttagagtattt aacgatcatacagccatggctacaggagtcaggtttggaaagcacgcaaattatgttgca tctacttctatggatagaactcttaaattatatggtctctaa

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