Lepeophtheirus salmonis (salmon louse): 121117765
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Entry
121117765 CDS
T08214
Name
(RefSeq) probable lysosomal cobalamin transporter
KO
K14617
LMBR1 domain-containing protein 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04977
Vitamin digestion and absorption
lsm04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
121117765
04980 Cobalamin transport and metabolism
121117765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121117765
Membrane trafficking [BR:
lsm04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
121117765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
SAYSvFN
Motif
Other DBs
NCBI-GeneID:
121117765
NCBI-ProteinID:
XP_040568192
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All DBs
Position
5:complement(48452762..48456462)
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AA seq
518 aa
AA seq
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MYDPSWSAWIYYGIAGCFALLFSSIYVLWYRSPAVNWLAVLVCVASLTATLLTSFLVPVD
IFLVSSFKFKNGTYQPWAEDPLVRDQTEKSVLALYYFSYTFVATFLFIILPFCYFFFDYN
PEEATRYRLLRSLQFTCLSLVLILTFALLGYFIPFKEEIPPTILLGFLQPLKGIPVFLLN
LLNVIGTFFLIIYTGIGISSLSCGMIRRERSVHARREVVISQLEEVEQRINDIRSRFAED
LIPYIEQVDLDRLEQQARLLRRSHYVLEQKARSFLNRLLLCIRPFEMTFGIMFMIVSFFI
VLSLILSSVDRAMHSNGPSSGYSLNNTTLPNPIEDVLMFTQKIFPMDFILYINIVLLLIF
GSVSGLKTVGIGCFCIPAYDVQSGKTQTRGLIWVCAILIYIIVALNVFMFSLVPNYTTFG
NQVFVMNDTSANTTNTLFCESRKEGYKEHCYQTRISFLLTAYHDTMWIFDALYYWLHWVF
IVVVLIGSLLAVYIRRHSFYRNHNEEDDEVLVNDVNVG
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatccatcttggtctgcttggatttactacgggatagcaggatgttttgctctg
cttttctcaagtatctacgtcttatggtataggagtccggcagtgaattggttggccgtc
cttgtctgtgtggcctctttgactgctacactcctcacctcttttctcgtcccagttgat
atattcttggttagttccttcaaatttaagaatggaacatatcaaccatgggctgaggat
cctttggtcagagatcaaaccgagaaatccgttttggctctctattacttctcctacacc
tttgtagccacgtttctctttattattctcccattctgttacttcttctttgactataat
ccagaagaagccactcgttatcgacttctgagatcccttcaattcacgtgtctgagcctt
gttcttattttaacatttgcactcttaggctacttcattccttttaaagaagaaatcccc
ccaaccattctcttgggattccttcaacccttgaaaggaatcccagtatttcttctgaat
ttattgaatgtgattggaacctttttcctaataatatacacaggaattggtataagttcc
ttatcttgtgggatgattcgaagagaaagatcagtccacgctcgaagagaagttgttatt
agtcagcttgaggaagttgaacaaagaattaatgacataagatcacgttttgctgaagac
cttattccctatattgagcaagtggacttggatcgacttgaacaacaggctcgtcttctt
cgcaggtctcactatgtattggaacaaaaggctcgttcctttttgaatcgactactcctt
tgtattcgtccttttgaaatgacctttggaattatgttcatgattgtttcctttttcatt
gtactgtctctcatattatcatcagtagatagagcaatgcactcaaatggtcctagctct
ggatatagtcttaacaacaccactcttcccaatccaattgaagatgtattgatgtttaca
caaaaaatatttccaatggatttcattctgtatattaatatagtcctattattgattttt
ggatcagtttcgggattaaaaacagttggaattggttgtttttgcattcctgcatatgat
gtacagtcaggaaaaacacaaacaagaggtttaatttgggtttgcgctattttgatttat
atcattgtcgccttaaatgtcttcatgttctcactcgtacctaactacacaacttttggc
aatcaagtctttgtaatgaatgatacatccgcaaatacaacaaatactttattttgtgaa
agtcgaaaagagggctataaggaacactgctaccagactcgaatatcctttcttttgaca
gcatatcacgataccatgtggatttttgacgctttatactattggcttcattgggtcttc
attgtagttgttctcattggatctcttctcgcagtatacatccgaagacattcgttctac
agaaatcataatgaagaagatgacgaagttctggtcaacgacgttaatgttggttga
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