KEGG   Lepeophtheirus salmonis (salmon louse): 121117814
Entry
121117814         CDS       T08214                                 
Symbol
Ref1
Name
(RefSeq) THO complex subunit 4-B
  KO
K12881  THO complex subunit 4
Organism
lsm  Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03013  Nucleocytoplasmic transport
lsm03015  mRNA surveillance pathway
lsm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lsm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121117814 (Ref1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    121117814 (Ref1)
   03015 mRNA surveillance pathway
    121117814 (Ref1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsm03019]
    121117814 (Ref1)
   03041 Spliceosome [BR:lsm03041]
    121117814 (Ref1)
Messenger RNA biogenesis [BR:lsm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     121117814 (Ref1)
    TREX complex
     121117814 (Ref1)
Spliceosome [BR:lsm03041]
 Complex C
  Other components
   EJC/TREX
    121117814 (Ref1)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    121117814 (Ref1)
SSDB
Motif
Pfam: RRM_1 FoP_duplication YHR127W_C
Other DBs
NCBI-GeneID: 121117814
NCBI-ProteinID: XP_040568248
LinkDB
Position
5:complement(39089461..39091154)
AA seq 231 aa
MADKIDMSLDDIIKRTKKTPRRGMGSGRGRGRGARRSGGGRRGGGKPSFSTRGLPAKGKW
THDKYDGVRRGGISTGSGPVKLVVENLDFGVSDSDIQELFSEFGRLKTAAVHYDRSGRSL
GTADVIFERKSDAVKAMKQYNGVPLDGRAMTIQLATSDFGKPSLGSPRRGGPKGVAKTNM
PRRRSNGRVVKVGGERGRGGRRGGKRGAKRSPVPTAEDLDKQLDTYNSARS
NT seq 696 nt   +upstreamnt  +downstreamnt
atggcggataaaatcgatatgagtctggatgatatcatcaagaggacgaagaagactcct
cggcgtggaatgggaagtggtcgtggacgtggaagaggtgctcggcgctccggaggaggc
cggcggggaggaggaaaaccctccttttccactcgtggactcccagccaaaggtaaatgg
actcacgacaagtacgatggagtccgccgtggaggtatttccaccggatctggtcccgtc
aaactggttgtagagaatttggattttggagtgtctgactcggacatccaagagcttttc
tccgaattcggaagactcaaaacagccgccgtgcactacgaccgatctggacgctccctt
ggaacagcagatgtcatcttcgagcgaaagagcgatgctgtgaaggccatgaagcagtac
aacggcgtgcctttggatggaagagccatgactattcaattggccacttcggactttgga
aagccaagtttgggatctccacgcagaggtggccccaagggcgtcgctaagaccaatatg
ccccgtcgcagatccaacggacgtgttgtcaaagtaggaggcgaacgcggccgaggagga
cgccgtggaggcaagagaggcgccaaacgaagtcctgtgccaactgctgaagatctcgac
aagcaactggacacctacaacagcgcaagatcttaa

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