Lepeophtheirus salmonis (salmon louse): 121117814
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Entry
121117814 CDS
T08214
Symbol
Ref1
Name
(RefSeq) THO complex subunit 4-B
KO
K12881
THO complex subunit 4
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03013
Nucleocytoplasmic transport
lsm03015
mRNA surveillance pathway
lsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121117814 (Ref1)
09122 Translation
03013 Nucleocytoplasmic transport
121117814 (Ref1)
03015 mRNA surveillance pathway
121117814 (Ref1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121117814 (Ref1)
03041 Spliceosome [BR:
lsm03041
]
121117814 (Ref1)
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121117814 (Ref1)
TREX complex
121117814 (Ref1)
Spliceosome [BR:
lsm03041
]
Complex C
Other components
EJC/TREX
121117814 (Ref1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121117814 (Ref1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
YHR127W_C
Motif
Other DBs
NCBI-GeneID:
121117814
NCBI-ProteinID:
XP_040568248
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All DBs
Position
5:complement(39089461..39091154)
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AA seq
231 aa
AA seq
DB search
MADKIDMSLDDIIKRTKKTPRRGMGSGRGRGRGARRSGGGRRGGGKPSFSTRGLPAKGKW
THDKYDGVRRGGISTGSGPVKLVVENLDFGVSDSDIQELFSEFGRLKTAAVHYDRSGRSL
GTADVIFERKSDAVKAMKQYNGVPLDGRAMTIQLATSDFGKPSLGSPRRGGPKGVAKTNM
PRRRSNGRVVKVGGERGRGGRRGGKRGAKRSPVPTAEDLDKQLDTYNSARS
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaaatcgatatgagtctggatgatatcatcaagaggacgaagaagactcct
cggcgtggaatgggaagtggtcgtggacgtggaagaggtgctcggcgctccggaggaggc
cggcggggaggaggaaaaccctccttttccactcgtggactcccagccaaaggtaaatgg
actcacgacaagtacgatggagtccgccgtggaggtatttccaccggatctggtcccgtc
aaactggttgtagagaatttggattttggagtgtctgactcggacatccaagagcttttc
tccgaattcggaagactcaaaacagccgccgtgcactacgaccgatctggacgctccctt
ggaacagcagatgtcatcttcgagcgaaagagcgatgctgtgaaggccatgaagcagtac
aacggcgtgcctttggatggaagagccatgactattcaattggccacttcggactttgga
aagccaagtttgggatctccacgcagaggtggccccaagggcgtcgctaagaccaatatg
ccccgtcgcagatccaacggacgtgttgtcaaagtaggaggcgaacgcggccgaggagga
cgccgtggaggcaagagaggcgccaaacgaagtcctgtgccaactgctgaagatctcgac
aagcaactggacacctacaacagcgcaagatcttaa
DBGET
integrated database retrieval system