Lepeophtheirus salmonis (salmon louse): 121117821
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Entry
121117821 CDS
T08214
Symbol
Tnpo-SR
Name
(RefSeq) transportin-3
KO
K15436
transportin-3
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03013
Nucleocytoplasmic transport
lsm03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121117821 (Tnpo-SR)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121117821 (Tnpo-SR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsm03016
]
121117821 (Tnpo-SR)
Transfer RNA biogenesis [BR:
lsm03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
121117821 (Tnpo-SR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
121117821
NCBI-ProteinID:
XP_040568258
UniProt:
A0A0K2TN44
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Position
5:complement(6037670..6040991)
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AA seq
930 aa
AA seq
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MESMNNNNCSTTNNNNETPIPTTETVVAAINTLYNHPDPKETKRASTWLIVFQNSVYAWK
ISDEILHAQISEEASCFAAQTMRAKIQRSFNELPKDAHSSLRDSLLKFALNLNSGSRTVL
SQLCLALADLVLLLPEWSGALDDLSSRIHDRKILLEIFTLLPEEVGSRHISLGDLRRKSI
EKDFVNFSPKCLEFLNQCTEDPSLRSSILRCFRSWIDIRAISIDQLHQNPLIGITFQVLA
DTESSREAHEAASEAVRSILYRVEEDCPPGSVLELNLVTVIRNLEEPYHMAVANEDSEKA
TNYCRIFTECGETMLEKIFDLPIEKQPHYAISIFDSILLCCGHPDYELTDITFNLWYRVS
EELYNKQKYIPLFRPYIERLINALYKHCQMEPDSTEILARGDFALFRSRVSSFMTETIYI
VGAEEIFKHMFLNNIECGSPTWEVLEASLFLMQSVATSVVSPDNFVVKRVLESILNLPPD
THIAVKNTSVKLVGQLGNWVNGNPQYLDKILNFMLISIKNPKLSDCAANALLYVCTACRK
HMAPHYEGLVHIIKSLDSFSLKNDSAVSLLKAVAVITSDLHPVQVHMAAKTLLWLQAEPL
NAIVCGESTSSSSDPTIYLGRLAAVLRNINLKHDARSPHPCFPAIQETWPVLAKTFIKYQ
QNGRYMEQCCRTVRFAIRCVGTEFASLVEELVKIIITQYKVYSHSCFLYLGSILVDEFAH
IQGCVMGLLGMLGDFIEPTFKLLNESDGLRNHPDTVDDFFRLNTRFLQRATVPYLQTSVI
NPITECAIMSVTLDHPDANASVMKFLSTLLYAGRSREAKEDFEIRKGLVANIRNLYGEKL
IDKLINASIFHLCSSAFDDVSEVIYELLLSDRTAVSLWVQACLNSLPTTNSNGLQTVTKE
KLVHFHDRLTNAHNIMSVLSSIKDFYRLWK
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggagtccatgaataataataattgcagtacgacaaacaacaacaatgagactcccatc
ccaacgactgaaaccgtggtggccgccatcaacactctctacaaccatccggatccgaag
gaaacgaaacgggcctccacttggctcatagtattccaaaattctgtgtatgcttggaag
atatcggatgagatccttcacgcccaaataagcgaggaagcttcctgttttgcggcccaa
acgatgcgagccaagattcagcggtccttcaatgagctgcccaaagatgcgcactcctcc
ctccgcgattccttgcttaagtttgctttaaatctgaactctgggtctcgaacagtgctg
agtcagctgtgcttggctctggctgacttggttctcttgcttccggaatggagtggtgca
cttgatgatttatcgtctcgaatacatgataggaaaattctattagaaatatttaccctc
cttccagaagaagtgggctcccgacatatttcccttggagatttaaggagaaaatcaatc
gaaaaagactttgttaatttctcaccaaaatgtttagaattcttgaatcaatgcacagag
gatccaagtctcagatcctcgattttgcgttgctttcgatcatggattgatatacgtgct
atatcaatagatcagcttcatcaaaatcctcttatcggaattacttttcaggtgctagca
gatacagaatcttctagggaagctcatgaagctgctagtgaagcagtccgttctattctt
taccgagttgaagaagattgtcctccaggttcagttttggaattgaatctcgttactgtt
attcgtaaccttgaagaaccttaccatatggctgttgccaatgaagattcagaaaaagcc
actaattattgtcgaatatttacggagtgtggagaaaccatgcttgaaaaaatattcgat
ttgccgatagaaaaacaaccacactacgccatttctatattcgattccattctactgtgt
tgtggtcatccagactatgaactaacggatatcaccttcaatttgtggtatagagtatca
gaagaactttacaacaagcagaagtatattcctcttttccgaccttacattgaaagactc
ataaatgctctatataaacactgtcagatggaaccggactctacagaaattttggctaga
ggagatttcgccctattcagaagcagagttagttcctttatgactgaaactatatatatt
gtgggggctgaagaaatctttaaacacatgttcttgaacaatattgagtgtggctctccg
acatgggaagtactggaagcatctttatttctaatgcagtcagtggcaacttcagtggtc
tcgcctgataattttgtcgtgaaaagagttttagagagcatacttaatcttccaccagac
actcacattgctgtcaaaaatacatcagtgaaattagtcggacaattgggaaactgggtt
aatggaaatcctcagtatcttgataaaatacttaattttatgttgatttctatcaaaaat
ccaaaactatctgattgtgctgcaaatgcactgctctacgtttgcactgcttgtcgtaag
catatggctcctcattatgagggtctcgtacacatcatcaaatccctagatagtttctct
ttgaagaatgattctgctgtctcactccttaaagcagttgctgttattacatccgatctg
caccctgttcaagtacatatggccgccaaaacgctcctttggttacaagctgagccttta
aatgcaattgtctgtggtgaatcaacaagtagctcttctgacccaactatatatttagga
agattggctgcggttcttcgcaatattaatctcaaacatgatgctagatctcctcatcca
tgctttccagccattcaagaaacatggccagtattagcgaagactttcatcaagtaccaa
caaaatggccgttatatggaacaatgttgtcgaaccgtacgatttgccattcggtgtgtt
ggaacagaatttgcgtcactggttgaagaacttgtaaaaatcatcatcacccaatacaaa
gtatattctcatagttgctttctctatttgggctccattcttgtggatgagtttgcacat
attcagggctgtgttatgggactacttggcatgctgggcgattttattgaacctactttt
aaacttttgaatgaatctgatggacttcgaaatcatcctgatacagttgatgattttttt
cgtttaaacacacgattccttcagcgagctacggttccctatttgcagacaagtgttatt
aatcccattactgaatgtgcgatcatgtctgttaccctagatcatccagatgctaatgcc
tcggttatgaaatttctctcaaccctattatatgcgggccgatcaagagaagccaaggaa
gatttcgaaatacgtaaaggactagtggctaatattcgcaatctatatggagaaaaacta
attgataaactgataaacgcatctattttccatttatgtagttctgcctttgatgatgta
agcgaagtaatttatgagttattactcagtgaccgtactgctgtcagtctttgggtacaa
gcatgtctcaattcactccccacaacaaattccaatgggttgcaaaccgttaccaaggaa
aagttagtccactttcatgatagattaacaaatgctcacaatataatgagtgtcttgtct
tctattaaagatttttaccgcttgtggaaataa
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