Lepeophtheirus salmonis (salmon louse): 121117858
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Entry
121117858 CDS
T08214
Name
(RefSeq) carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsm01009
]
121117858
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsm03021
]
121117858
Enzymes [BR:
lsm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
121117858
Protein phosphatases and associated proteins [BR:
lsm01009
]
HAD phosphatases
Fcp/Scp phosphatases
121117858
Transcription machinery [BR:
lsm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121117858
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NIF
Motif
Other DBs
NCBI-GeneID:
121117858
NCBI-ProteinID:
XP_040568311
UniProt:
A0A0K2UCD0
LinkDB
All DBs
Position
5:48113546..48117023
Genome browser
AA seq
313 aa
AA seq
DB search
MDTVITQVRPPHNDNQTRLPTVPSSAPCVGSPEEESRASTAEVEGKSKKKRRNFLRSLVC
CLGLRGGTSSSSGSSSLRVSEEGHPLQNPHASSLSAQSKQLPLHPSNHPEQQPLLPPLEP
RESHKKCIVIDLDETLVHSSFQPINNADFIVPVEIDGNIHQVYVLKRPYVDEFLCKMGEL
YECILFTASLAKYADPVADLLDKWEVFTYRLFRESCVYHRGNYVKDLGRLGRELHKILIV
DNSPASYIFHPENAIPVVSWFEDMNDRELLDLIPLLENLSKVENVFSILQANKTGSLFME
QNSIKKKDTNFLM
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgtcattacacaggtcagacccccccacaatgacaaccagacacggcttccc
acggtcccctcctcagctccatgtgtgggatctccggaagaggagtctcgagcgtcgacc
gcggaagtggaggggaaaagcaagaagaaaagaagaaactttttacgttccttggtgtgc
tgcttgggactgcgcggagggacgagctcctcgtcgggttcctcttctctgcgcgtctct
gaagagggacacccccttcaaaatccgcacgcctcctctttatccgcacagtcaaagcag
cttcctcttcatccttccaaccaccctgaacagcagccccttcttccaccgctcgagccg
cgggagagccacaagaagtgcattgtcatcgatctcgacgaaaccctagttcatagttct
tttcagcccatcaacaatgcggatttcatcgtccctgtcgaaattgacggaaatattcat
caagtttacgttttgaagaggccctatgttgatgaatttctttgtaaaatgggagagttg
tacgaatgtattttgtttaccgcaagtcttgctaagtacgcagatcctgtcgccgatctt
ttagacaaatgggaagtctttacatacagattgtttagagaatcttgcgtatatcatcga
ggcaactacgtcaaagatcttggtcgtcttggacgtgagttgcacaaaattttaatcgtc
gataattcccctgcttcatacatttttcatccagaaaacgccatacctgttgtctcttgg
ttcgaagacatgaatgatcgtgaactgttagatttaatacctctccttgagaaccttagc
aaagtcgaaaacgtgttcagcattctgcaagcaaataaaacaggctccctctttatggaa
caaaattcaatcaagaagaaggatactaatttcttgatgtaa
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