Lepeophtheirus salmonis (salmon louse): 121117860
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Entry
121117860 CDS
T08214
Symbol
sdt
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
121117860 (sdt)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsm04990
]
121117860 (sdt)
Domain-containing proteins not elsewhere classified [BR:
lsm04990
]
PDZ domain-containing proteins
MAGUK family proteins
121117860 (sdt)
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Ortholog
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GFIT
Motif
Pfam:
Guanylate_kin
PDZ
PDZ_6
SH3_2
SH3_1
SH3_9
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121117860
NCBI-ProteinID:
XP_040568313
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All DBs
Position
5:complement(48109498..48113077)
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AA seq
678 aa
AA seq
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MSNLGVQFANIMVEFERDTREMPVDVPDSFVAVSKTPPKYPPPPERRVSANSSLTSSSHS
HSSSLLPTPQQSMRIQKYSEDLKKRNKKNEDLFRQSLRNSIQIRENGVVNQAFRLNEAPS
PLMTLSSMTEALQRLEKYDTTKDTLAAFSHLFQNKEFKASISIHQAVSNAEGMSPASLEL
CSIAEECLNTLKIDKNDPETEDLIELLSNLSHLFEVHDKIARQNTFLKSLISEEDALLSR
LSHYAEPNIKIVKIEKTNEPLGATVKNEDEAVVIGRIIRGGVAERSGLLREGDEILEVNE
VELRGKNVNEVCDILANMHGTLTLLVVPSRVLGTNSASSKPNSVMHIKSYIDYDPEDDPY
VPCRELGISFQKGDILHVINQCDPHWWQAFRDGEDDQTLPGLIPSASFQEQREAMKQTII
AQDSEKYVHGTRSTGGFLCAKKSGRKKRRKVPYLSEDEVDSDHILTYEEVALYYPRADRK
RPVVLVGPPNIGRHELRKKLMQDSSRFAAARPHTSRPRGPDEEDSKEFHFISRLQFEKDI
LARKFVEHGEYDKSYYGTSFEAIRSVISSGKICVLNLHPQCLKILKSSDFMPYVVFVAPP
SLEKLKRWKMENSDNPASDEDLKETIERAREMEDVYGHFFDMIIIYSDPVKAYQQLLNEI
NLLEREPQWVPLDWQKYF
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacttgggcgttcaattcgcaaatataatggtggagtttgagagggacactcgg
gaaatgccggtggacgtgccggactcgtttgtggctgtgagtaagacccctccgaaatac
cctccgccccccgagcgccgtgtctctgccaatagttccttgacgtcctcctcccactcg
cactcctcttcgctccttcccacgcctcagcagtccatgcggatacaaaagtattcagag
gacctcaaaaagagaaacaaaaaaaatgaggatctctttcgccaatctcttcgaaactcg
attcaaatacgagaaaacggagtggtgaatcaagcattccgccttaacgaagctccctcg
cccttgatgactctctcctccatgacggaagctctccaaagacttgaaaaatatgataca
actaaagataccttggcggccttctcccatctcttccaaaacaaggagtttaaggcttcc
atctccattcatcaagccgtgtcaaatgcagaaggaatgtctcctgcttcattagagtta
tgtagtatagctgaagagtgcctcaatactttaaaaatagataaaaacgatcctgaaact
gaggatttaatagagttgttgagtaatttgagccatttgtttgaagtacacgacaaaatt
gctcgacaaaatacatttttaaaaagcctgatatccgaagaggatgctttattgagtcgt
ctcagccattatgcggaacctaatatcaaaattgtgaaaattgagaaaacaaatgagcct
ttgggagcgactgtcaagaacgaagatgaggcagtagttataggacgtataattcgcggt
ggagttgctgaaagaagtggacttttacgggaaggagacgaaattcttgaagtgaatgag
gtagaattacgtggtaaaaacgtaaacgaagtttgtgatattttggctaatatgcatgga
acattaacactattagtagttccttcacgagtattaggaacaaacagtgcttcctcaaaa
cccaatagtgtaatgcacatcaaatcatacattgactatgacccagaagatgatccttat
gtgccttgtagagaattaggaattagttttcaaaaaggtgatatcttacatgttattaat
caatgcgatccacattggtggcaagccttccgtgatggagaagacgaccagactcttcca
ggtctaattccttcagcgagctttcaagaacaaagagaggcgatgaaacaaactatcata
gctcaagattctgaaaaatatgttcatggaacaagatccacaggtggctttctttgtgcc
aagaagagtggtcgaaaaaaacgacgtaaagttccttatctatcagaagatgaagttgat
tcagatcatatcctcacatatgaagaagttgctttatattatccaagggcagataggaaa
aggcccgttgtgcttgttggacctccaaatattggcaggcatgaattaaggaaaaagctt
atgcaagatagttcgcgatttgcggcagctagaccacatacttctcgtccaagaggacct
gatgaagaagactccaaagaatttcatttcatctcacgccttcagttcgaaaaagatata
cttgctcgaaaatttgttgaacacggcgaatatgataaatcttattacggaacaagcttc
gaagctattcgaagtgttatatcatctggaaaaatatgtgtacttaatctccatcctcaa
tgcctcaagattctaaaatcttcagattttatgccctacgtcgtgtttgttgcacctccg
tccttagaaaaattgaaaaggtggaaaatggaaaattcggataatcctgctagtgacgag
gatctaaaagaaacaatcgaacgagctcgggaaatggaagatgtatatggacatttcttt
gatatgattatcatttattctgatcctgtcaaagcctatcaacaactcctaaatgaaatc
aatcttcttgagagagaaccacaatgggttcctttggattggcaaaaatatttttaa
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