Lepeophtheirus salmonis (salmon louse): 121117890
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Entry
121117890 CDS
T08214
Name
(RefSeq) multiple PDZ domain protein
KO
K06095
multiple PDZ domain protein
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121117890
NCBI-ProteinID:
XP_040568341
LinkDB
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Position
5:complement(21445798..21453106)
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AA seq
1591 aa
AA seq
DB search
MPEMETLDVELIKDSQGLGITIAGYTCEREELSGIFVKSVTDGSAASRSGMVAVNDQIVE
VDGNSIQGYTNQQAVEMLRSTGKSVKLKLIRYVHGLKFEQLQQAIANSQSNTPITSPTQM
IQLSPHISPTKSLHIEAIESKNQFNNDEVNENAVYEINNRVDSFEGELDPIIEREIIQKW
SDYMGVQYEIVVAQLKKFQSTGGLGISLEGTVEKVDGEEHNPHHYIRSVLPDGPVGHNGL
LKSGDELLEVNGQKLIGLYHTDVVSILKDLPVWVRIVCARNTSVDPPRSKLISNNNTSDE
STVSVERLVKAKSDGSISSMGTNTGNNESTSSMNSKSRSLEPLTSLAMWAEEVLDIDLIK
GDKGLGFSILDYQDPLNKDETVIVIRSLVPGGVAQQDGRLIPGDRLMKVNQVDLCHATLD
EAVQALKGAPKGLVIIGVSKPLPSQLDDDLTLSKDASITNSNNNGSDDNTEVRSEISDME
SDTPNLPPPIPTSPPPEDEDEKNSSRINKSIGIPPLPEALERHIKVIKDSEALGVQVDIE
EDGINGLIVKSITPGGTLARDGRIQPGDYMVKVNNELLRNIKHSEALNILKRTHKVPLNQ
DIQISFVPAGDAVVYKTTMITRLAQQKEPPIPAVREKVTSFITINNSKPEVSVFNLEDSN
AVITQEMSPTYSTEQKIMIENTLGESNTDDVNPVPPPTPPPPLIEDLEKEKNPVEEEFLP
PPPLPNTPPPIMPTVPPRPSKSLTSITSKDIDLSIGKTISDDDESSLPLRTSKAYKSKHW
GPEREVTVFRAPNKGLGISIVGGKVDPPSSDDGDSSSGSLNASVSGIFIKNVLEGSPAGQ
TGQLCTGDRILEVDGNDLRTASHERAVDVIRQSNNPVVFLVQSLLGFNEEEDDPTDNDDD
DEEEEEERDMVEGDTNQGEEGNDNISMPKDKIEAPPEFANTSTDKEEEEEESEEGELSGT
ETLSNGFVIDKASASFLNKSSIDDEEEDDYRYTMDKIRRKYGKFPGKLSLVRLNKGIHGL
GISLAGHKDRNQMAVFICGLIPQGNAARDGRIKIGDSVLEVNGKVLHNRCHLNASSLIKN
FPDSAVTFVLLTPEEGGSQCAVKPLSANQFPHGLLNKNNPIERYKKYAGLRQIRIKKEDQ
GLGIMIIEGKHTEAGTGVFVSDLQPDSAADKAGLLVGDMILCVNGEDFVGASYESAARVL
KSLDGIITMCVANPNVESAPPTAATEEIKKPILPPKPPVAPKPPGLSPTHKPSTVLKKPL
ASPRVKEEKPSEKQLPATCDIVPGMDTTIEITKDKDDDGKPMGLGLSIVGGSDTLLGAIF
IHEVYEKGAAHKDGRLRPGDQILEVMNDNLRNVTHSYALHALRQTPNKVRLVIHREDDEI
YETFEVELIKRKDRGLGLSIVGKKSGPGVYISEVVKGGAADSDGRLVQGDQIILVNGNDL
TNSSQEEAAPILKMAQGKITMKVRRLRVGNRQQQRQATAPVSGLHHVSQHSNDSNSAMAP
IINGTPKTIRLERGEQGLGFSIVGGFGSPHGDMPIYVKTVFQTGAAAEHGGLKRGDQIVS
VNNISLEGLTHQDAVNILKNCEGTVTIQILS
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaatggaaactttagatgtcgaattaattaaagactctcaaggattaggcatt
acaatagctggttatacttgtgaaagagaagaattgtctgggatatttgtcaaatccgtt
actgatggttcggcagcatctcgatcgggtatggtagctgttaatgatcaaatcgtagaa
gttgatggcaattcgatacaagggtacacaaatcaacaagctgttgaaatgcttagatct
actggaaagtctgtgaagcttaaactgattcgatatgttcatggactaaaatttgaacag
ctacaacaagctatagccaatagtcaatctaacacccctattacctctcctacacaaatg
attcaactatctccacacatttctcctacaaaatctcttcatatagaggccattgaaagt
aaaaatcagttcaataatgacgaagtgaatgagaacgccgtttatgagatcaacaacaga
gtggatagttttgaaggagaattagatcccataatcgaaagagaaatcattcaaaaatgg
tcagattatatgggagttcaatatgaaatcgttgttgcgcaattaaaaaaattccaatca
actggtggacttggaataagtctggaagggactgtagaaaaagtggatggagaagagcat
aatcctcatcattacattagaagtgttcttccagacggacctgttggtcataatggttta
ctcaaaagtggagatgagttactagaagttaatggacagaaattgattggactgtatcat
acagatgtcgtatctatactaaaagatcttccagtttgggtcaggatagtttgtgctcga
aatacttctgttgatccacctcgttctaagctcattagtaacaataatacgagtgatgag
tctactgtatcagttgaaagactggtgaaggcaaagtctgatggttccatttcgagtatg
ggaacaaacacaggtaataatgagtctaccagcagtatgaattcaaaatctcgttccctt
gagccacttacttctcttgctatgtgggccgaggaggttttggatattgatttgatcaag
ggagataaaggtttaggcttttctattttggactaccaagatccattaaataaggacgaa
actgttatagttattagaagtttagttcctggtggcgttgctcaacaagatgggcggctt
attccaggagacagattaatgaaagttaatcaagtcgatctgtgccacgcaacattagat
gaagctgttcaagcactgaagggtgctccaaaaggtttagtgataataggagtatctaaa
ccactcccgtctcaattggatgatgatttaacactctccaaagatgcatctataaccaat
tcaaataacaatggaagtgatgataacactgaggttcgaagcgagattagtgatatggag
tctgatactccaaatcttcctcctcctatacctacaagtcctccaccagaggacgaagat
gaaaaaaattcctccagaattaataaatctataggaattcctccccttccagaagctctt
gagagacacataaaggtaatcaaagattcagaagctcttggtgttcaagttgatattgaa
gaagatggtatcaatggtttaatcgtaaaatccattacacctgggggaactctagctaga
gatggaagaattcagccgggtgattacatggttaaagtcaataatgaattattacgaaac
ataaaacactctgaagctttgaatattttgaaaagaactcataaagtaccacttaatcaa
gacatacaaatatcttttgttcctgcgggtgatgcagttgtttataaaacaacaatgatt
actagactagctcaacaaaaggaaccacctattccagctgtgagagaaaaagttacttca
ttcattactatcaataactctaagccagaagtatctgtttttaacctagaagattctaat
gcagttataactcaggaaatgagtcctacatatagcaccgaacaaaaaataatgatagaa
aatacattaggagagtccaacacggatgatgttaatccagttcctcctcctacaccacca
cctccattgatagaagatttggaaaaagaaaaaaatcctgtagaagaagagtttctacct
ccacctccattgccaaatacacctcctcctattatgccaactgtacctcctcgtccatca
aaatctttaacttcaattacatccaaagatattgacctaagtatcggtaaaacgatatca
gatgatgatgaatcctctcttcctctaaggacgtcgaaggcctataagtcaaagcactgg
ggtcctgagagagaagtaacagtttttagagctccgaataaaggcctagggatttccatt
gttggtggaaaagtggatcctccttcaagtgatgatggagacagttcttctgggtctcta
aacgcatctgtaagtggaatttttatcaaaaatgttttagaaggaagtcctgcaggccaa
actggacagctatgtaccggagatcgaatacttgaagtagatggtaatgatttgagaaca
gcgagtcacgaaagggctgttgatgtgattcggcaatcaaacaatcctgttgtatttctt
gtccaatcactactaggctttaatgaggaggaggatgaccccactgacaatgatgatgat
gatgaggaggaggaggaagaaagagatatggttgaaggagatactaatcaaggagaagag
ggcaacgataacataagcatgccgaaagacaaaatagaagcaccaccagaatttgccaat
acatctacagataaggaggaagaagaagaagaatcggaagaaggcgaattatccggcaca
gaaacacttagtaatggttttgtgattgacaaagcttctgctagttttcttaacaaaagt
agtattgatgatgaagaagaggatgactatagatacactatggataaaatcagaagaaaa
tatggaaaatttccaggcaaattaagcttggtacgtttaaacaaaggtattcatggactt
ggtatttctttggctggacataaggatagaaaccaaatggctgtttttatatgtggatta
atccctcaaggtaatgctgctagagatgggagaattaaaattggtgattctgttttggaa
gtcaatggaaaagtattgcacaataggtgtcatttgaatgcatcatctcttattaaaaac
tttcctgattctgctgtcacttttgttctactaactcctgaagaaggtggctctcaatgt
gctgttaaacctctttctgccaatcaatttcctcatggattattaaataaaaacaaccca
attgagaggtacaaaaaatatgcaggcctaagacaaattagaattaaaaaggaagatcaa
ggtttaggtatcatgataatcgaagggaaacatactgaagctggaacaggagtatttgta
tcagatcttcagcctgattctgctgcagataaagcgggattacttgtgggggatatgata
ttatgcgttaatggtgaggatttcgtcggagcctcttatgaatcagcagctagagtatta
aagtcacttgatggaatcatcacaatgtgtgtagctaaccccaatgtagaatctgctcct
cccactgcagctacagaagaaataaaaaagccaatacttccaccaaagcctcctgttgcc
cccaaaccacctggactgtctcctactcataagccttcgacagtattaaaaaaacctttg
gcatctcctagagtcaaagaagaaaaaccttcagaaaagcagttaccggcaacatgtgat
attgttcctggaatggatacaactattgaaattactaaggataaagatgatgatggtaaa
cctatgggactaggattaagcattgttggtggatctgatacactactaggagctatattt
attcatgaagtttatgagaaaggtgcagcacataaagacgggcgtctacggcctggtgat
caaattctagaagtgatgaatgacaatctgaggaacgtgacccattcttatgctcttcac
gctctaagacaaacgcccaataaagttcgacttgttattcatcgagaagatgatgagatt
tatgaaacctttgaggttgaattaattaagaggaaagatagaggtcttggcctgtctatt
gtgggaaaaaagtctggaccaggagtatatatatctgaagtagtgaaaggaggtgcagcc
gactcagacggccgtttagtacaaggtgatcaaattatccttgttaatggtaatgattta
acaaattcttcccaagaggaagctgcgccaattctaaagatggcgcaagggaaaataacc
atgaaagtgcgtcgactacgagttggtaatcgtcagcaacagcgtcaagcaactgctccc
gtctctgggcttcaccatgtttctcaacattctaatgattcaaattctgcaatggctccc
attattaatggtactcctaaaaccataagacttgagcgtggagagcaaggtcttggattt
tctattgtcggtggttttggatctcctcacggagatatgcctatttacgtaaaaacagtt
tttcaaactggagcagcggcagagcatgggggtttaaagcgaggagatcaaattgtctct
gtaaataatattagtttagaaggcctaactcatcaagatgccgtcaacatcttgaagaac
tgcgaaggaactgttacaatacaaattctttcttag
DBGET
integrated database retrieval system