Lepeophtheirus salmonis (salmon louse): 121118051
Help
Entry
121118051 CDS
T08214
Symbol
dor
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04140
Autophagy - animal
lsm04142
Lysosome biogenesis
lsm04145
Phagocytosis
lsm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
121118051 (dor)
04142 Lysosome biogenesis
121118051 (dor)
04140 Autophagy - animal
121118051 (dor)
04148 Efferocytosis
121118051 (dor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121118051 (dor)
Membrane trafficking [BR:
lsm04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121118051 (dor)
Hops complex
121118051 (dor)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
FilR1_N
VPS11_N
zf_RING_Vps8
zf-C3HC4_2
Clathrin
Occludin_ELL
Motif
Other DBs
NCBI-GeneID:
121118051
NCBI-ProteinID:
XP_040568525
LinkDB
All DBs
Position
5:69247071..69252524
Genome browser
AA seq
986 aa
AA seq
DB search
MTTPFIRQKLSEDSPIFSKSKVSYSPNHPIIFFKTRNNVIVLLQADKNLEIIHQNTGLMD
RINLSDILGPFKVHDLFLDPTGKNILISLKPDKSSETPKCLAILHDSLKPKILTKAKGEL
ITAVGWPQKGAGPILIGTAPGSIIETELDSKGNERYWKKLTELKGQQRITGLEYHRTAHS
SKYFIIATTSSRIYQFVGYVTEDEERKPPIFASLINQYNNEFKFVEFNSRNPSRASPSVL
DFYYFPDASEDRQKASLPLNPKLFGWMSESGVYCGNVNPFEATNEDGVLTDTKLISFPDT
SSLSGNNGSQLPPPKWFLLTEYHCVLGYEKVMRVVSLLDERIIYEDEIDDVHGRGKLNGL
ARDPISGVIYSFSDYSIMKYKVVSEERYAWRIHLQSGNFNESKESISISDPHHSIKMNEI
MKAEAAKLYDEGKFLEAAMTYSKSMASFEEVALKFVDIDDKSALLYFLKKRIENMRASET
TQLTMTAVWVIEIFMNQINYTKDLLSQNERKGSEEDLKKQLKDLNKEFVAFVSQPRISET
VSLNRSTIYELLSSHGDIDNLISLSLMNKDYDVAVKYKIQNGHFKSALSILETQRLISAF
YMFGPCLLREIPSDFVISLKKLGPKIDPNQIIPCMIAVTEEGSVVGVENEAINYLEYVIE
EFKCKEESLHNYLLSLYSQNDQLDKIGTYLTAYGTDIEDIPYDVKYALKLCNNRKELTSE
VIFLFCVLGELECAVDLALSEADIEEAKEILKFSREEDVQKMIWLKIAQHVVQKKNDIKS
AMEFLQQTELVKIEDILPFFDDFVTIDHFRDAICQSLHDYSQHISTLKSEMEEANNSAET
IRAEMREFKNKYAFVRGNDKCAVCSDFLLCRPFHLFICGHKFHTDCLCEGVVPHLSLAKK
KKIEQLQFDISKLENVDSLSEDANNPGETISIDSKGPNLSKKDQLLAELDDLIAAECLFC
SDIMVKMIDQPFFEDEDYENALKMWV
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgacaacacctttcattcggcaaaaattatcggaggattctccaatattttcaaaatcc
aaagtgagctactctccgaatcatcccatcatcttcttcaagactcggaacaatgtcatt
gtactcctgcaagcggataaaaacctggaaatcattcatcagaatacgggtctcatggat
cgtatcaatttgtcagatattctagggcccttcaaagtccatgatctctttttagatccc
actggaaaaaatatacttattagtcttaagccggataagtcctccgagacccccaagtgc
cttgcaatccttcatgactcactcaaacccaaaatattgaccaaagccaagggagaattg
atcactgccgtgggatggcctcaaaaaggtgctggtccaattctaataggaacagctcct
ggttcaataattgagacggaattggattcaaaaggaaacgaacgatattggaaaaaatta
actgagttaaaaggacaacaaagaataacgggcttggagtaccatcgaactgctcattcc
tctaaatatttcattattgctactacttcttctcgtatctatcaatttgtaggatatgtg
acggaagatgaggagcgaaagcctcccatattcgctagtttgattaatcaatataataat
gaatttaaatttgttgagttcaattcaagaaatccatctagagcctcaccatcagtccta
gatttttactatttcccggatgctagtgaagataggcaaaaggcttcccttcctctaaac
cccaaattgtttggatggatgtcagagtctggtgtatattgtggtaatgtaaatcccttc
gaagctacaaatgaggatggtgtacttacggatacaaaactaatttcctttcctgatacg
tcttcattaagtggaaacaatggttcccaattaccacctccaaaatggtttcttttaaca
gaatatcattgtgttttaggatatgagaaagtaatgcgtgttgtgagccttttagatgaa
aggatcatttatgaagatgaaattgatgatgttcacggtagaggaaaattaaatgggctt
gctcgtgatccaatatctggtgttatatattcattttcggactactcaatcatgaaatat
aaagttgtgtcagaagagagatatgcctggagaattcaccttcaatcagggaattttaat
gaatccaaagagtcaatttctatctctgatcctcaccattcaattaaaatgaatgaaatc
atgaaagctgaagccgctaaactttatgatgagggcaaatttttagaagctgccatgact
tactcaaagtccatggcatcttttgaggaagttgccttaaaattcgtggatattgatgat
aaatcagctttattgtacttcttaaaaaagagaattgagaatatgcgtgcatcagaaact
actcaattaactatgacggccgtttgggtcattgaaatttttatgaatcaaatcaattat
actaaagatttgctctctcagaatgaaagaaaaggctctgaagaggatctaaagaagcag
ctaaaagatttaaataaagagtttgttgcattcgttagtcaacccagaatatcagaaaca
gtgtctttaaatcgaagcactatttatgaacttctttctagtcatggagatattgataac
ctgatttcactttcattgatgaataaggactacgatgtagctgtcaagtataaaatacaa
aatggtcattttaaatccgccttgtcgattttggaaactcaaaggttaatatctgctttt
tatatgtttggaccatgtctacttcgagaaataccctcggactttgtgatctcacttaag
aaattgggtcctaaaatagatcccaatcaaattattccatgtatgattgctgtaactgag
gaaggatctgttgttggagttgaaaatgaagctatcaactacttggaatatgtaatagaa
gaatttaaatgtaaagaagagtcactgcataattatttactatctttatattctcaaaac
gatcaactcgacaaaattggtacttatctcactgcctatggtactgatatagaagacatt
ccgtatgatgtaaaatatgcattaaaactttgtaacaataggaaagaactgacttcagaa
gttatattcttgttttgtgtattaggagaattggaatgtgccgtggatttagcactaagt
gaggctgatattgaagaggcaaaagaaatattaaaattctcaagagaggaagatgttcag
aaaatgatttggctcaaaatagctcaacatgtagttcaaaagaagaatgacatcaaaagc
gctatggaattccttcaacaaaccgaacttgtcaaaattgaggatatattgccatttttt
gacgattttgtaaccattgatcattttagagacgcaatttgtcaatctcttcatgattac
tcccagcatatatccacattgaaatcggaaatggaagaagcaaacaattcagcagagacg
atccgcgctgaaatgagggaattcaaaaataaatacgctttcgttcgtgggaatgacaag
tgtgccgtttgttctgattttctgttgtgtcggccctttcacctatttatatgcggtcat
aaatttcataccgattgtctctgtgaaggagtcgttccacatttgtctttagcaaaaaag
aaaaaaatcgaacagctccaatttgatatctctaaattggaaaatgtggatagtctgagt
gaggatgctaataatccgggtgaaactatttctatcgattctaagggtccaaatttatcg
aaaaaagatcagctacttgctgagttagatgatttgattgccgcagaatgcttgttttgt
agtgatattatggtaaaaatgattgatcaacccttttttgaggatgaagactatgaaaat
gccttgaaaatgtgggtgtga
DBGET
integrated database retrieval system
