Lepeophtheirus salmonis (salmon louse): 121118073
Help
Entry
121118073 CDS
T08214
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm00061
Fatty acid biosynthesis
lsm00071
Fatty acid degradation
lsm01100
Metabolic pathways
lsm01212
Fatty acid metabolism
lsm04146
Peroxisome
Module
lsm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121118073
00071 Fatty acid degradation
121118073
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121118073
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lsm01004
]
121118073
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsm04147
]
121118073
Enzymes [BR:
lsm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121118073
Lipid biosynthesis proteins [BR:
lsm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121118073
Exosome [BR:
lsm04147
]
Exosomal proteins
Exosomal proteins of breast milk
121118073
Exosomal proteins of breast cancer cells
121118073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
121118073
NCBI-ProteinID:
XP_040568552
UniProt:
A0A0K2VAT5
LinkDB
All DBs
Position
5:69633487..69636742
Genome browser
AA seq
729 aa
AA seq
DB search
MRRRKSKDDEDLESIPPDAGLVGNLGLGVIKTLIYVYDFLTYPIYAAIQRPWEVREASNA
LRSRPISKSDSEITYAPVYRSTERLDAFRAAGVDNMLDCWKLAVSLHGDKDCLGTRHVLE
EKDEVQPDGKVFKKWAMGEYQWKSFNEIEELSTDFGKGLRELGLETKENICIFAESKAEW
MISALGCFKQTFPLVTLYANLGEDAIAHGVNQTQVSHLITTHDLLPKLKNVLERTPSIKY
IIFFEDQLNATDRSGYKSGVRILSFQEVIELGSKSETKATPPTKDDPAIIMYTSGSTGVP
KGVILPHESLIGTIAAFHLVVKDKIPEETYLGYLPLAHIYELLAEMTMLIHGIKVGYSSP
NTMIDKSTKVMKGSKGDCSVLRPTLMCAVPLVIDRIYKGIHENLSKKSKFMRSLLHFCYH
YKSHYRRLGMRTPIMNALIFRPMRAIVGGKVRVIVSGGAPLSHNIHDYVSCALDIPIHQG
YGLTESCAGGSVMHREELSTGRVGPPGQGVLIRLINWEDGGYRVTDKPRPRGEIVIGGPN
IAHGYYKLPQKTAEDFYKDENNVRWFKTGDVGEFAEDGTLKIIDRKKDLVKLQYGEYVSL
GKVETVIKTCPLVENVCAYGDPTKSYCVALVVPDRNKLTELGESIGIYNASLEDLCMNEK
VIATMQKETASYGRKNGLEKFEVPGAITLCTEMWTPESGLVTAAFKLRRKPIQDFYQKEL
KKMYETRRT
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggaggaagagtaaggatgatgaggatttggagagcattcctccggatgctgga
ctcgttggaaatctgggactgggtgtgatcaagacattgatttatgtgtacgatttccta
acatatcccatttacgctgcaattcagcggccctgggaagtgcgtgaagcgtccaacgct
cttcgctcgcgtccgatttccaaaagtgatagcgaaataacgtatgctcctgtgtaccga
tctactgagcggctggatgcttttcgagcagcgggggtggacaatatgttggactgttgg
aaattggccgtgtctttgcacggggacaaggactgcctcgggacacggcatgtcctggag
gaaaaagacgaggtgcaacccgatggaaaagtctttaagaaatgggccatgggagaatac
caatggaagagctttaacgaaattgaggagctgagtacggattttggaaaaggattgagg
gaattggggctggagacaaaggaaaatatttgcatttttgctgagtcgaaggcggagtgg
atgattagtgcccttggatgctttaagcaaacttttcctcttgtgactctctatgccaat
cttggagaggatgctattgcccatggtgtcaatcaaactcaagtctctcatctcattacc
actcatgacttactacccaaattaaagaatgtgttggagcggacaccgtctattaaatac
attatttttttcgaagatcaattgaatgctacggatcgtagtggatacaaatcaggcgtt
cgtattttgagctttcaggaagtgattgaattaggatcaaaaagtgagacaaaagcaact
ccacctaccaaagatgatccagcgatcattatgtatacaagcggttccactggtgtccca
aagggtgttattctaccccatgaatcccttatcggtactattgccgctttccacttagtt
gtcaaagataaaataccggaagaaacatacttgggttatttacctcttgcgcatatatat
gaactacttgctgaaatgaccatgcttattcacggcattaaagtaggttattcctctcca
aatacaatgattgataagagcaccaaagtcatgaagggaagtaaaggtgattgttctgtt
ttaagaccaacactcatgtgtgctgtcccattagtcatcgatcgcatttacaagggtatc
catgaaaacctaagtaaaaaaagtaaatttatgaggtcattacttcatttttgctatcac
tacaagtcacattatagacgcctgggcatgcgaactcctattatgaatgcgctgatattt
cggcctatgagggctattgttggtggaaaagtgagagtaatcgtttctgggggtgctcct
ctttctcataatattcacgactatgttagttgtgcattggacataccaattcatcaggga
tatggcctaactgaatcttgtgccggtggttccgtcatgcatagggaagaattaagtact
ggtagagtaggtcctccaggacagggagtcttaatcagattaatcaactgggaggatgga
ggttatagagtcacagataaacctcgacctagaggtgaaattgtgattggcgggcctaat
attgctcatggttactacaagctacctcaaaaaactgctgaagatttctacaaagacgaa
aataatgtaaggtggtttaaaacaggagatgtaggtgaatttgcagaggacggaactctc
aaaattattgataggaagaaagatctcgttaaacttcagtatggagaatatgtgtccctc
ggtaaagtagaaactgttatcaaaacatgccctctcgttgaaaatgtctgcgcttatggg
gatcctacaaaatcatactgtgttgcacttgttgtaccagatagaaacaagctgacggaa
cttggtgaaagtatagggatctacaacgcaagccttgaggatctatgtatgaatgaaaaa
gtaatcgcaactatgcaaaaagaaactgcatcatacggtagaaaaaatggcctagaaaaa
tttgaagttcctggggcaatcactttatgcacagaaatgtggacacctgaatctggactt
gtaactgcagctttcaaactcagaagaaagcctattcaagatttttaccagaaagagttg
aaaaaaatgtatgaaactcgaagaacgtga
DBGET
integrated database retrieval system
