Lepeophtheirus salmonis (salmon louse): 121118094
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Entry
121118094 CDS
T08214
Name
(RefSeq) uncharacterized protein
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121118094
Transcription factors [BR:
lsm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121118094
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121118094
NCBI-ProteinID:
XP_040568569
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Position
5:complement(39479964..39543157)
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AA seq
333 aa
AA seq
DB search
MFNLEEKFSTLQQQQQTAEEEGFQGRSYLMESVGLNNNYVSLKPKEEVYRSLRINIDSKT
PYSDATQTKKHRVNHIKRPMNAFMVWSQLERRKIIEVTPDKHNAQISKELGQRWKALNEV
ERHPYVEEAERLRLLHIKEYPDYKYKPRKKVLNGPNASTSSKDEIRGGGGIVKSKRGRKP
KSYYIQLQREEEEKSIKGMYKEKAPHPLKKTTLPSLPMMQLSLIQNENYLRKSIINDRLL
GLNEFYECDTSIIKEEVSISDMDYSTLDDLDRITDLLPIESEPLVSPRSVSSSSSSESIS
SFEHGIQDSLSIYSNPFHSHPNHPQVYQPFLQI
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatttagaagagaagttttcaactttacagcaacagcagcaaacagcagaagaa
gaaggattccagggaaggtcttaccttatggaatcagttggtttgaataacaattatgtt
tctctcaagcccaaggaggaagtttatcgtagtctaagaatcaatatagattcaaaaact
ccatattcggatgcaacacagacaaagaagcaccgagtcaatcatattaaacgcccaatg
aatgctttcatggtttggtcccagttagaacgacgaaaaataattgaagtgacacctgac
aagcacaatgctcaaatctctaaagagttggggcagcgatggaaggcgttgaatgaggtt
gagagacatccctacgtggaagaagctgagcgtcttcgacttctccatatcaaagagtat
cccgattataagtacaagccacggaaaaaagttttgaatggaccaaacgcatctacttct
tcaaaggatgaaatccgaggtggaggagggatcgtcaaatccaaaaggggaaggaagccc
aagtcctactacattcaactccagagagaagaagaagagaagagtatcaaggggatgtac
aaggagaaagctccgcatccccttaagaaaaccactttaccatctcttcccatgatgcaa
ttatctcttatccaaaatgaaaactatctcaggaaaagcatcataaatgacagacttttg
ggcctcaatgaattttatgagtgtgatacctctatcataaaagaagaagtctccatctct
gatatggattacagcaccttagatgacctggatcgtatcacagacctcttaccaattgag
tccgagccactagtctctccaaggtcagtttcatcctcctcctccagtgagtcaatctct
agctttgaacacggtatccaagacagtctttccatctactcaaatccctttcattcacat
cctaaccatccgcaagtgtatcagccatttctgcaaatataa
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