Lepeophtheirus salmonis (salmon louse): 121118130
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Entry
121118130 CDS
T08214
Symbol
RecQ4
Name
(RefSeq) ATP-dependent DNA helicase Q4
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsm03032
]
121118130 (RecQ4)
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121118130 (RecQ4)
Enzymes [BR:
lsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
121118130 (RecQ4)
DNA replication proteins [BR:
lsm03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
121118130 (RecQ4)
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
121118130 (RecQ4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SWI2_SNF2
HTH_11
GlutR_N
TrbI_Ftype
Motif
Other DBs
NCBI-GeneID:
121118130
NCBI-ProteinID:
XP_040568608
LinkDB
All DBs
Position
5:complement(65687815..65691476)
Genome browser
AA seq
1007 aa
AA seq
DB search
MGESVESVRRQKLINTFRHSKAKIKEWEKEFTLKNRGEKVSLLKAPKEIQVCYKNCKKIQ
YFLDKPDLVVQNPPSSSSSTWGSHLNVAANRKASKRQESSERLSSLILLDSQSLGPPKVR
TSLKRKKRGASSSLIGNLHDEENTEEDKEDMKDEEGDNDVFTEIPSSASQLKVAPSSEKS
TIALTRRIDGPNTTTITKPQDSEEEEETPQSKRPRLEQDPSPSTQEVQSSMKDKLLSKKN
SWNENYRRINLKKKCFTRFNKGIARKREANANKSKFRSKGKSYQPSQSKKNLKLPPTSDM
SSSIVIPEPLLPVVEIEATSKLRSMSDEDLDTMVHEALISFGHSEFRRGQKEAIFRILRG
ESTLVVLSTGSGKSLIYQIPAYLLAKEDSRLTIVVSPLVSLMEDQLRNMPTLIQADLFHS
DLGRTQLVKIKDGLRENKLAILFMTPETLFSQLKTLKEFIPRLGFVCIDEAHCMSQWSHN
FRPAYFQLGGAIRESLKATTILGLTATATEKTITTIAERLQVDSEGGIIKGTVLRKNLLM
SVSKDFRRDEALIEMLNSEKFSALGSIIIYCTRREECERVAAIIRTRRRGENSSKNNIIA
SSFHAGLSHAKRKRIYNDFISGKLKIIVATIAFGMGINKSDIRGVVHYNMPSTLESYVQE
IGRAGRDENESYCHLFMDAKGKDLNELKRHVFSNSVDRVIVRKFVGCIFNDKTFTRDKEE
YRDVVLSTFKLIELLDMPEENITTLMCYLENHEKQWIRVGRQISDVVKIQIYGSTDKIRN
SVPDHRILDYIILNKTSDTSYRVTEMAKELQVTCEHVWDALARLKYAGVTIDYGQPGFHL
RVRNDVSENDLDDIQNLLCDKIFQREKNEINKLQRTFRTFLNVSHDTWRTCIESFDHGNC
DKLNAYINDYFSEQAEETTQVSDSLSSSTVDEIPIRQQIRQFLSIYSDQSWTGRSIARVF
HGIPSPNFPAQTWYRARGYWKAFMDIDFNAILRLATKEIVGMRTGLS
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgggggaatccgtggagagtgttcgtcgtcaaaagcttattaataccttccgtcactcc
aaggccaagatcaaagagtgggaaaaagaatttacattgaagaataggggtgaaaaagtg
tccttgctcaaggctcccaaagaaattcaagtctgctataaaaactgtaagaagattcaa
tatttcctggataagccagacttggtcgtccagaatcctccttcatcctcatccagcaca
tggggatctcatctgaatgtagctgccaatagaaaggcctccaagaggcaagaaagctct
gagcgtctgtcttcgcttattcttctagattcccaatccttgggtcctccaaaggttcgc
acatctctcaaacgaaaaaaaagaggggcttcatcatccttgatagggaatttacatgat
gaagaaaacacggaagaagacaaggaggacatgaaggatgaagaaggagacaatgatgta
tttaccgaaatcccctcctccgcgtctcagttaaaagtggctccttcatcggagaaatcc
acaatagcattgacaaggcgtatagacggacccaacactacaaccataacgaaaccccaa
gactctgaagaagaagaagagacaccccaaagtaaaagaccacgattggagcaagatccc
tctccttccacccaagaagttcagtcatctatgaaggacaaacttttatctaaaaagaac
agttggaatgagaattatcgacgaattaatttgaagaaaaaatgctttacgcgtttcaat
aaaggcattgccagaaaaagagaggcgaatgcgaacaaaagcaagtttagatctaaaggc
aaaagttatcaaccatctcagtccaaaaaaaatctcaagcttccccctacgagtgatatg
agttcctccattgtcattcctgagcctttactgcctgttgtagaaattgaagcaacctca
aagcttagatctatgtccgatgaggatttggatacgatggttcatgaagctcttatatcc
tttggtcattcagaatttcgtcgaggacaaaaagaggcaatttttcggatattgagggga
gagtcaactcttgttgttttgtcaactggatctggaaagagtttgatttatcagatacct
gcatatcttcttgctaaagaagattcccgtcttaccattgttgtttcaccccttgtatca
ttgatggaagatcaattacgaaatatgcctactctgattcaagcagatttgtttcatagt
gatctcggtagaactcaattggtaaaaattaaagatggccttcgagaaaataaattagct
attctgtttatgactccagaaactcttttttcccaattgaaaacactcaaggagtttatt
cctcgtctaggctttgtctgtatcgatgaggcacattgtatgtctcaatggtcgcataac
tttcgtccagcatactttcaacttgggggagcaattagggagtcattgaaagccactact
attttaggactcacagccactgccacagagaaaacgattactacaatagctgaaagattg
caagttgattctgagggaggaataatcaagggaactgttttaagaaaaaacttgctcatg
tctgtctccaaagatttccgtcgtgatgaagctcttatagaaatgttgaatagtgaaaaa
tttagtgctcttggatcaatcataatatactgtactcgaagagaagagtgtgaacgtgta
gctgcaattattagaacgagaagacgaggtgagaattcctccaagaacaacataattgcc
tcttcatttcatgcgggattaagtcatgcaaaaaggaaaagaatatataatgacttcatt
tctggaaaattaaagattattgtagcaacgattgcatttggaatggggatcaacaagtcg
gacatcagaggagtcgttcattacaatatgccttcaactcttgagagttatgttcaagag
ataggaagagctggtagagatgagaatgagtcttattgtcacttattcatggacgccaaa
ggcaaagatctcaatgagctcaaaaggcatgttttttcaaattcagtggatcgagtcata
gtgagaaaattcgttggctgtatattcaatgacaagacttttactcgtgacaaagaggag
taccgggatgttgtactttcaacgtttaagctcattgagcttttggatatgcctgaagaa
aacatcacaaccctcatgtgctatcttgaaaatcatgagaaacaatggatacgggtcggg
cgtcaaatcagtgatgtcgttaaaattcaaatttatggaagcactgataagattcgaaat
agtgtaccggaccatcgaattctagattacattatacttaataaaacgtctgatactagc
tatcgagtaacagaaatggccaaagaacttcaagtcacttgtgaacatgtatgggatgcc
ttagcaaggcttaaatatgcaggcgtgactatagattatggtcaaccaggatttcatctg
cgagtacggaacgatgtaagtgaaaacgacttggatgacattcaaaacttgctctgcgac
aagatatttcaaagggaaaaaaatgagataaacaaacttcaaaggacttttcgtactttt
cttaacgtatctcatgacacctggagaacttgcattgagtcttttgaccatggtaattgt
gataagttgaacgcttacatcaatgattacttttctgaacaggctgaggagactacccaa
gtttcagattccctttcttcttccactgtggatgaaataccaattagacaacagattcgt
caatttttgtccatttattctgatcaaagttggactggaagatcaatagcaagagttttt
cacggtattcctagccctaattttccggcacaaacatggtatcgagctcgagggtattgg
aaagcttttatggatatagactttaatgctattcttcgacttgctacaaaagaaatagtt
gggatgcgtacaggtttatcctga
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