Lepeophtheirus salmonis (salmon louse): 121118187
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Entry
121118187 CDS
T08214
Name
(RefSeq) homeobox protein rough-like
KO
K09362
homeo domain only family, other
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121118187
Transcription factors [BR:
lsm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
121118187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
121118187
NCBI-ProteinID:
XP_040568674
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Position
1:complement(38418748..38434326)
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AA seq
297 aa
AA seq
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MDFLFRCEPSPLLELHTHIMMNEEDRKNIDSNNDPMIIPQRNDPNITSARNLSFDKKKTS
SPREFFAKLYEDFTTHSSSSSSSSPPLPHLGADEEDLDEESESREAKVFSFPLVPDSEYW
NSHFNHPHPKLHSYPLPHSHQEQQNSLLTDFPFNGGLAAFLARRKRRESRQRRQRTTFTS
DQTLRLEVEYQRNEYISRPRRFELAENLDLTETQIKIWFQNRRAKDKRIEKAHIDQQYRY
IAFGSVPPSSYSLLCSDCYYKPGSCGPIHRGTPLPPQQNPLSNHFKQVQELKNENPI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggactttttattcagatgtgaaccctctccattgctggaactacatacacatatcatg
atgaacgaagaagataggaaaaatatcgatagcaataatgatcccatgatcatccctcaa
cgcaacgatcccaatattacctctgcacgcaacctctcatttgacaaaaagaaaacatcc
tctcctcgagaattcttcgccaaactctatgaggattttactacccattcctcctcctct
tcttcttcttccccacccctgccccatcttggggctgatgaagaagatttggatgaagag
tctgagagtcgggaagcaaaggtgttttccttccctctggttccggattcggaatattgg
aactctcattttaatcatcctcatcctaagcttcattcctatcctttacctcattctcac
caggagcaacagaatagtttgttaacggattttccttttaatggaggacttgccgcattt
cttgcacgaaggaaacgaagagaatcccgccaaagacgccaaagaaccacttttacgtca
gatcaaacccttcgattggaggttgaataccaaaggaatgaatacatatcaagaccacga
agatttgaattagctgagaatttggacttgacagagactcaaatcaaaatttggttccag
aatcggcgggcaaaggataaaagaatcgaaaaggcacatattgatcagcaatataggtat
attgcttttggatctgttcctccgtcatcgtattcccttctttgctcagattgctactat
aagcctggttcatgtggacctattcatcgaggtacgcctttaccccctcagcaaaatcct
ctttcaaatcatttcaaacaagttcaggaattgaaaaatgaaaatcccatttaa
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