Lepeophtheirus salmonis (salmon louse): 121118308
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Entry
121118308 CDS
T08214
Name
(RefSeq) uncharacterized protein
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04120
Ubiquitin mediated proteolysis
lsm04137
Mitophagy - animal
lsm04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121118308
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121118308
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121118308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121118308
Enzymes [BR:
lsm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121118308
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
121118308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-RING_6
Sina_TRAF
Motif
Other DBs
NCBI-GeneID:
121118308
NCBI-ProteinID:
XP_040568818
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Position
5:44768062..44795360
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AA seq
482 aa
AA seq
DB search
MSIFLSSNGSNHEKSRSKVRRGSVPVLHTALKLGGKSFSSETSGSNSGNSNSNAHITKKP
SFFSKSGFGPLNYPSSTGHPGENGHLNMYMCTLRESCEYSPEETETDWDYQKELRSASAI
GSTSKSGVSGGLVVGGVGVGVKQSSDSGTTLNMNNLKDMLKCSRCNCVLYPPILQCLGGH
MLCKSCSEKKPACGKCDADVSEVPATFAENISQHFQIPCSFQYRGCQEMIPFKLQQDHEE
LCHYKPVQCPEFDCSVSKPMAEILKHFRSEHHHHFINAHGNVFNGDIRCDDGNMIMGTER
RWAPTMMRLDPGEGETSISSNSINNADSNNPNSCGLLTTPSHHFFLEIIRTKHGIWHMWV
WYLGEPEEASVFRCEISIRKKNRDEDSELKYSGRVHSIRIPPNRIILSGCLLTFTDFTVN
HFRSMGGDHPPHVQRHQVMDYKVFVSRIKKPGASERMVTAGLSKMLRRFSIDSTTGNGGK
VV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtccatctttttatcttccaatggatcaaaccatgaaaagtcccgctccaaagttcga
cgtggttctgtccctgttctacacacagcacttaaattaggagggaaatctttctcttcg
gagacctcgggctctaacagtggcaatagcaatagcaacgctcatataacgaaaaaacca
tcttttttttcaaagtccggatttggaccactcaattatccttcctcaactgggcatcca
ggtgagaacggtcatttgaatatgtatatgtgcactcttcgtgagagctgtgagtatagt
ccagaggagactgagactgattgggattatcaaaaggaactaagaagcgcatcagcaatc
ggcagcacctctaagtctggggtcagtgggggattagtcgttggaggagttggagtcggg
gttaaacaaagctcagattcgggaacgactctcaacatgaataatctgaaggatatgctt
aaatgctctcgctgcaactgcgtcttgtatccaccgattcttcaatgtctgggcggtcat
atgctctgcaagtcctgttcagagaagaagcccgcttgtggaaagtgtgatgcagatgtc
tctgaggtcccagctacttttgcagaaaacataagtcaacattttcaaattccgtgcagt
tttcagtatcggggatgccaagaaatgattccttttaagctacaacaggatcacgaggaa
ctctgtcattacaaacctgttcaatgcccagaatttgactgttccgtctcaaaacccatg
gcagaaatcctgaaacattttcgttctgagcaccatcatcacttcatcaacgcacacggg
aacgtattcaatggggatattcgatgtgatgatggaaacatgattatggggacagagagg
cgatgggctcctaccatgatgcgcctggatcctggagaaggtgaaacttccatctcatca
aatagtatcaacaacgcagattccaataatccaaactcttgtggtcttctcacaactcca
agtcatcactttttcctagaaattattcgtacaaaacatgggatttggcacatgtgggtc
tggtatttaggggagcctgaggaggcctcagttttccgatgtgagatatctatcagaaaa
aagaatcgggatgaggattcagagcttaaatattcgggacgagttcatagtattcgcatt
ccacctaatcgtatcattctatcaggctgtttactcacttttacagactttacagtaaat
cattttagatccatgggaggggatcatcctcctcatgtacaaagacatcaagtcatggac
tacaaagtgttcgtctcacggattaaaaagcctggagcaagtgaaaggatggtgactgca
gggctttccaagatgctccgacgatttagtattgacagcaccactggaaatggaggcaag
gttgtttaa
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