Lepeophtheirus salmonis (salmon louse): 121118344
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Entry
121118344 CDS
T08214
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121118344
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
121118344
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
Motif
Other DBs
NCBI-GeneID:
121118344
NCBI-ProteinID:
XP_040568852
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Position
5:complement(12127308..12130023)
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AA seq
728 aa
AA seq
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MVKNHYTSKIIGFNDLESLQTYGFRGEALHAILESSDELQILSRFRGASMGSSFLFDSKG
NIIKKCSQAIVSGTTITVTRLFSKTPVRRERYTKSSAMKKADLKDIETLILGFSLLHPHI
RFLLSSHKSVIFQRPVVKTFQDAVIATLGKSVIKNWVNISLNEDEGVRVEMWVSKTVPDP
TLCRSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEP
SKKTVFFKQEESILKLVEAKLKELYCNEKIEDSFHILEDKVVETQRVENNKDHFIVREYQ
KHTLENSDWNAQSKSDGILKAKHDSHITLNTKPLSSESIGNSMQKENSPQITSVDDVALR
NSTLIDKQTKFFNLSFEKSIEHNISSTTPKSKSKNIIDDSIMSKDPGSHDVLFKNNSFIS
STLIDSSNKNASFVNNSKEDTINSKMSTLHSWATGKTMPESPPVGMVVPLMEGKGIKRPN
VFKRIQDHHPPKKSRSYGDDSLIKLIKPYHQKETIKLHRHEVRVDFDIKKLHSKDCVSKS
RHINELTVIGKLSDSEIWTGLLNESIYVLHPSRFREISIYNKLLDAQALNPVEMPYPMII
DKYREDIITLASDSRLSRNGFKVSVDGRYLTHSCHSVLSEIDVDDLFHILDIIKKNPNAS
LAECRSPKIKRFFQKECMKLVSNCPPGINNKEMLQLYSSSLKYFKNIAQETCFHRKKVML
KIYDYKDL
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaaatcattatacctccaaaataattggatttaatgacttggaatctcttcaa
acctatggttttcgtggcgaggctctccatgcaattcttgaatcttcagatgaactccaa
attttatctcgatttcgaggtgcatccatgggctcttcgtttctatttgattccaaagga
aacataataaaaaaatgcagtcaggctatagtttcaggaacaactatcacagttacaaga
ctattctcaaaaactccagttaggcgagagagatacacaaaaagttcagccatgaaaaaa
gctgatctcaaggatattgaaactcttattttgggattttctctcttgcatccccacata
cgtttcttattatcttctcataagtccgtaatatttcaaagacctgtggttaaaacattt
caggatgcggttattgcaacattaggtaaatctgttattaaaaattgggtaaatatctct
ctaaatgaggatgaaggtgtgcgtgttgagatgtgggtttctaagactgtccccgacccc
actttatgtcggtctaccaatgatagatgttttgtatatgttaacgataggccagtagaa
atgccaaagctctctcgtctactaaaaaaatatctatgtgatgccaaaaaaaaatcttat
cccatcgctctagtcacaataaatgtccctataaaggatattgatgctaatgtggagcct
agtaaaaagactgtattttttaaacaagaggaatcaatattgaagttggttgaagcgaaa
ttgaaagaactatattgcaatgaaaaaattgaggattctttccacatacttgaggataaa
gtcgtcgaaactcaaagagtagaaaataataaagaccactttatcgtgcgtgaatatcag
aaacatactcttgagaattcagattggaatgctcaatcaaagtcggatggcattctcaaa
gctaaacatgattcccatataactctaaatactaaacctttatcttctgaaagtattgga
aattcaatgcaaaaggaaaactcaccacaaattacttccgttgatgatgttgctcttaga
aattctactctgattgacaagcaaacaaaattctttaatttgtcttttgagaaaagtatt
gaacataatatctcttctactacgcccaagagcaaatctaaaaacataatagatgactct
attatgtctaaagatcctggatctcacgatgtgcttttcaagaacaactcttttatatca
tctacattaattgattcgtccaataaaaatgcatcattcgtaaataattcgaaagaagac
acaatcaactccaaaatgtcaactctacactcctgggcaacaggtaaaactatgcccgaa
tcaccaccagttggaatggttgttcctcttatggaaggaaaggggattaaaaggcctaat
gtatttaaaaggattcaagaccatcatcctcctaagaaatctcgtagttatggagacgat
tctttaatcaaattgataaaaccttatcatcaaaaagaaacgataaaattgcatagacat
gaggttcgtgttgattttgatataaaaaaattacatagtaaagattgcgtgagcaaatcg
aggcatattaatgaattaaccgtcattggtaaattatcggattctgaaatttggacgggg
cttttaaatgaatcaatttatgtacttcatccgtctagatttcgtgaaataagtatttat
aataaactacttgacgctcaagcattaaacccagttgaaatgccatacccgatgataata
gataagtatagagaagacattattacgcttgccagcgatagccgtttaagccgtaatgga
tttaaagttagtgtggatggcagatatttaactcactcttgtcatagtgtcttgtcagaa
attgatgtcgatgatttatttcatatcttggatataataaaaaagaatccaaacgcatct
ttggcagagtgccgttctcccaaaattaagagattttttcaaaaagaatgtatgaaactt
gtatcaaattgtccaccaggaataaataataaagaaatgctacaattgtattcgtcttcc
ttgaagtattttaaaaacattgctcaagagacttgctttcatcgaaaaaaagtcatgctc
aaaatatatgattacaaagacctataa
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