Lepeophtheirus salmonis (salmon louse): 121118505
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Entry
121118505 CDS
T08214
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121118505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121118505
Enzymes [BR:
lsm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121118505
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
HECT type E3
121118505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
VMAP-M8
Motif
Other DBs
NCBI-GeneID:
121118505
NCBI-ProteinID:
XP_040569021
LinkDB
All DBs
Position
5:complement(23186405..23190319)
Genome browser
AA seq
1037 aa
AA seq
DB search
MSHFRSHFDGEYRRKPIVSIRGSSKTESREDLINRTQIERQNREIFRLKNHNAVIIQSIF
RGYFERNTQKQMLRKEFEHSIKNNSYSKSISDIGNYLRKFNFFFNPEMDAQNLEWICNEC
LKRENEIIGLFDEEGDSKWFYRMAHLLRHLLLYLKTPRVNEGLPIKTLVAFTATGNTLLS
HLLPKTNYFSCLRCIFERYPDIHPDVLLLLKRPLTYISPETEDYNKLSLHSLTKSLLHPP
FSESIFYRLLPSLHPFPFKEWVHVLKESELSSISLFYAFLQLEKISLAEWSTSEYLEYIQ
VLSQLSLSLTKIFVTKEVDDESDSEDEMSDSNDENMKSVLSSQVQYSNPSLTDLIDGIKE
KLNDKKWTSYLIDSVVEKMDSEPVILKFLCRFLHNFMLTDNFLLTNYRIMYTLAFKPNIL
HKIWSVILNCKQASLFGDPPLLLNVIAKGLRMHNDERYEIVPLLAVFTSLFSFLLVTIND
TEFYGNDRSWMPFTLKELTPMSLNLRDVALGLIQLAFPESRLTIREDYQLAVQSARSPSN
KMNEEDPKDVTMWSHLFKIIVKLLRQLHIRDTRKQFCQDGHWINECVTLPSDRPSDISLR
RSRHYQPFRGLRVFSREEMETYGPPLSAKEMRLATILREMPYVISFNQRIVLFSQLISRD
KADYQGDRVNFLMGPSIDVTIRRKFIYEDALEKLSPEAEPNMKLKMRVEFKNIAGLREAG
IDGGGLFREFLGELVKTSFDPNRGFFRLTKDQRLYPNPSVHKIYEDFLPHYFFIGRMLGK
ALYENMLVEFPLASFFLHKLLEKSSVKVDIDHLQSLDPELYRNLLYLKNYDGCVQDLGLD
FTIVNEEVGTTSVEELKRNGSSIPVTNVNRTEYIHLIANYKLNKQIRLQSNAFRQGLSDV
INLDWLKMFNYKELQLVISGAETEIDVSDLRNHTNYTGGYAVDHPTVVIFWNVVESMTET
QKRHLLKFVTSCSRPPLLGFKELDPPFCVHNAGAEPHRLPTASTCMNLLKLPNFEEEKIL
KDKLLYAIESGSGFDLS
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtcccactttaggagtcactttgatggagagtatcgacgtaagccgattgtttccatt
cggggctcatctaaaacagagtctcgagaagatttaattaaccgaactcaaattgagcgt
cagaatcgtgagatcttccgattgaaaaatcataatgcagttataattcagagtatattt
agaggatactttgaaaggaatacacagaagcaaatgcttcgaaaagagtttgaacattcc
atcaaaaataacagttactcgaagtccatttctgatattgggaactatcttcgaaagttc
aatttctttttcaatccagaaatggatgctcagaatctagaatggatttgtaacgaatgt
ctcaaaagagaaaacgaaatcattggactgtttgatgaagaaggagactccaaatggttt
tatagaatggctcatcttctgcgtcatttattattatatctcaaaacacctcgcgttaat
gagggtttacctattaagactctagttgcttttactgccactggaaatactcttttatct
catctcttacccaaaactaattatttttcatgtcttagatgtatatttgaaagataccct
gatattcacccagatgtactccttcttttaaagcgacctcttacttatattagtcctgaa
acggaagactataacaaactttcattgcattctttgaccaagtcacttcttcatccacct
ttttcagagtctattttttaccgtctactcccctctttacacccctttccgttcaaggaa
tgggttcatgttctaaaggaatcagagctctcctccatttctttattctacgcttttctc
cagttggaaaaaatttctcttgctgagtggtcaacctcagaatatttagagtacattcaa
gtcttgagtcaattatcattatctttgacaaaaatatttgtgacaaaagaggtggatgat
gaatcggattcagaagatgagatgagtgattcgaatgatgaaaacatgaaaagtgtactt
tctagtcaagtacaatattcaaatccttctctgacggatctaattgatggtatcaaggag
aagttaaatgataaaaaatggacatcatatttgattgactctgttgttgaaaaaatggac
agtgagcctgtgattcttaaattcctatgtagatttttgcataattttatgctcacggat
aattttttactcaccaattaccgaataatgtacactttagcattcaagccgaacattctt
cataagatttggagtgttattttgaattgcaaacaagcatccttgttcggtgatccacca
cttctactaaatgtaattgccaaaggtttacgtatgcataacgatgaacgctatgaaatt
gttccacttttagccgtctttacgtctttatttagttttctcctagttactataaatgat
acagaattttacggtaatgatcgctcgtggatgccttttactttgaaagaactaactccc
atgtccctcaatctgagagacgttgcccttggacttattcagctagctttccctgagtcc
cgtcttacaataagagaggattaccaattggcggtgcagtcagcgcgttccccaagcaac
aaaatgaacgaagaagatccaaaagatgtgacaatgtggtcgcatcttttcaagataata
gttaaattacttcgacaattgcacattcgagatacaaggaagcaattttgtcaggatgga
cattggataaatgaatgtgtaactttaccctctgatcgtccatcagacatttctcttcga
cgatctagacattatcaaccctttagagggcttagagtgttttcgagggaagaaatggag
acatatggtccaccattatctgcaaaagaaatgagacttgctacaattctccgagaaatg
ccttatgtcatatcatttaatcagcgtattgtacttttttcacaattaatatcgagagat
aaggctgactatcaaggagatcgagtcaactttcttatgggaccttccattgatgttaca
attcgaagaaaatttatttatgaggatgccttagagaaactatctcctgaagcagaacct
aacatgaagcttaaaatgcgtgttgagttcaagaacattgctggactacgagaagcagga
atagatggtggtggactattcagagagtttttgggggaacttgttaaaacatcttttgat
cctaatagaggatttttcagacttacaaaagatcaaaggttataccctaatccatctgta
cataagatttacgaagatttcttgcctcattatttttttattgggaggatgttaggaaaa
gctctctacgaaaatatgcttgtggaatttccacttgcgagtttttttcttcataagtta
cttgaaaaaagttcagttaaagttgatatagatcatcttcaatctctggatccagagctt
tatagaaatctcttatatctaaaaaattatgatggatgtgttcaagacctaggattagac
tttacaattgttaatgaggaagtcggaacaacttctgtcgaggagttaaagagaaatggt
tcttcgattccagttaccaatgtcaataggacggaatatattcatcttattgctaattac
aagttaaataagcaaattcgattacaatcgaatgcatttcgacagggactttctgatgtt
ataaaccttgactggttaaaaatgtttaattacaaggaacttcagttggttatttccgga
gcagaaacagaaattgatgtctctgatctccgtaatcatacaaattatacgggtggatat
gcagttgatcatcccactgttgttatattctggaatgttgttgagtccatgactgagact
cagaagcgccatttgctcaaatttgttactagttgttcacgacctcctttattaggattt
aaggagcttgatcctccattttgcgttcacaacgcaggtgcagaacctcaccgtttacct
actgctagtacatgcatgaatctgttgaagctacctaattttgaggaagagaagatacta
aaagataagttgttgtacgctatagaatcaggctcagggttcgatcttagttag
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