Lepeophtheirus salmonis (salmon louse): 121118509
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Entry
121118509 CDS
T08214
Symbol
Cyfip
Name
(RefSeq) cytoplasmic FMR1-interacting protein
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121118509 (Cyfip)
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121118509 (Cyfip)
Factors involved in mRNA localization
Other mRNA localization factors
121118509 (Cyfip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
121118509
NCBI-ProteinID:
XP_040569024
LinkDB
All DBs
Position
5:complement(12782002..12787603)
Genome browser
AA seq
1259 aa
AA seq
DB search
MSEKVTLADALSNVDVLDELPLPDEVPWIEGQPAAILYEANFDTNFEDRNAYVTGVAKYI
EEATVHSELNKLLEKGQEHAVMLYTWRCCSRAIPQPKSNEQPNRVEIYEKTVEVLAPEVN
KLLNLMYFQKEAIERFCSEVKRLSHEEKRKDFVSEAYLLTLGKFINMFAVLDELKNMKSS
VKNDYATYRRAAQFLKVMADSQKLQESQNLSMFLATQGKIRDTLKDGLENIRNFEDLFCD
IINICQNMFENKSYLTPAEKHMLVKVMSFSLFIIDSDQVNIIKLNQKQRIRLDKLDKIFH
DLEVVPLFGDMQIAPFNYIKKTKHYDPSRWPLSSQNHLTSPQSDLSIGLGKMRDDHLKFS
SELARYSNEVTTTYKETPRSDPENKALTDLALRGLQLLSEWTSVVTELYSWKLLHPTDHH
QNSDCPKEAEEYERATRYNYSSQEKFALIEVIAMIKGLQVLMARMETVFTDAIRRNVYQE
LQDFVQIHLRDPLRKAIKNKKDLVRSIITSVRETCADWIRGIEPHDDPALKGKKDDGGYD
LKVPRRNVGPSSTQLYMVRTMLESLIAEKSGGKRTIRKDLDDNMINKIDKFHKTSFNWNY
LLNFSRSLRDCCDLSQLWYREFYLEMTMGKRIQFPIEMSMPWILTDHILSTKDSSYMECV
LYPLDLYNDSAHYALTVFKKQYLYDEVEAEVNLCFDQFVYKLSEQIYAHFKHLAGSILLD
KRFRQECQNVGTSIYNPPPNRYVTLLRQRHVQLLGRSIDLNRLICQRINNSILKSLDLAI
SRFEAGDITGVVELENLIKANKLTVKLLSEHLSLDDFNSLLSEANRNVLAPYGRITLHVF
WELNYDFLPTYCYNGATNRFVKCREISFTQHVQREKAATMAHHYLWGSKALNIANNTIYS
QFTGFVGIPHFRSIASLLGYQGIAVVMEELLKIVKSLVQGNILLFTKTLMKAMPYQCKLP
RYDYGSPGVLGYYHANLQDIVQYPDARTELFHNFREFGNAILFCMLMEQALSQEEVMDLL
HAAPFQNILPRPHCKEGEKPEVKQKRLEVKYAALQIVTNIDKFGNAKQAQIAREGDLLTR
ERLCCGLSIFEVILNRVKGYLDDPIWHGKAPGNGVINIDECTEFHRLWSALQFVYCIPLG
LNEFNVEQMFGEGLNWAGCVLIVLLGQQRRFECLDFCYHIFSVHRVDGKDDSVKGIQVKR
MVDRIRRFQVLNSQIFATLNKYLRTSSDADNLPAEHVRCFQPPIHQSLANASDYGTYRS
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaaggtcactctagcggacgcattgtccaatgttgacgttctggatgagctc
cctcttccggatgaagttccttggatcgagggacaacctgccgctattctctacgaagct
aactttgatacgaatttcgaggatcgcaatgcctatgtcacgggagttgccaagtatatc
gaagaggccacggtgcattcagagttgaataagcttctagaaaaggggcaagaacatgct
gttatgctctacacctggagatgttgctccagagccattccacaacccaagtccaatgag
caacccaatcgagtcgaaatatacgaaaagactgtcgaagtcctcgctccagaagtcaat
aaacttcttaatcttatgtattttcaaaaagaagcgattgaacgattttgtagtgaggtt
aaaagactttcccatgaggaaaaacgcaaagactttgtatcagaggcctaccttcttact
cttgggaaattcatcaatatgtttgctgttctggatgaactaaaaaatatgaaatcctca
gttaaaaatgattatgctacatatagacgtgctgctcaattcctgaaggttatggctgat
agtcagaagctgcaggagtcacaaaacttatccatgtttttagccacgcaaggaaaaatt
agggatactcttaaggatggattagaaaatattcggaattttgaagatttattttgtgac
attatcaatatttgccaaaatatgtttgaaaacaagtcctacctaactcctgctgaaaaa
catatgttggttaaagtgatgagcttttcactttttatcattgattcagatcaggttaac
attattaaattgaatcaaaagcaacgcatacgcttggataaactcgataaaatattccat
gatcttgaagtcgttccactttttggggatatgcaaatagctccatttaattacatcaaa
aaaaccaaacattacgaccccagtagatggcctttatcttcccaaaaccatttaacttca
cctcaatcagatttaagcattggcttggggaaaatgcgcgatgatcatttaaaattttca
tctgaattagctcgttattcgaatgaagtcaccactacttacaaggaaacgcctaggagt
gatcctgagaataaagctttgacggatttagcattgagaggccttcagctattgtctgaa
tggactagtgttgttacagaactatattcttggaagttactacatcccaccgatcatcat
caaaattcagactgtcctaaagaagcagaagagtatgaaagagcaactcgatacaactat
tcttctcaagaaaagtttgccttaattgaggtgatagcaatgatcaaagggcttcaagta
ctcatggctagaatggaaactgtttttacggatgctatccgaagaaatgtgtaccaggag
cttcaggattttgtccaaattcatttgagagatcctttaagaaaagcaataaagaacaaa
aaagatttagtaagaagtataatcacttcagtcagagaaacgtgcgccgattggatacga
ggtattgaaccgcatgatgatccagctcttaaaggaaagaaggacgatggaggttatgat
ctaaaggttcctagaagaaatgttggaccctcatccactcagctttatatggtccgcacc
atgttagagtctcttatagctgaaaaatctggaggaaagcgtacgatacggaaggatctg
gatgataacatgatcaataaaattgataagtttcataaaacatcttttaattggaactat
ttacttaattttagccgaagtttaagggattgctgcgatttatcacagctttggtataga
gaattttacttggaaatgactatgggaaaacgtattcaatttcctattgaaatgtcgatg
ccttggatactcactgaccatattttatcaactaaagactcttcttatatggaatgtgta
ttatatcccctggatttatacaatgatagtgcacattatgctctcaccgtatttaagaaa
caatatttatacgatgaggttgaagcagaggttaatttatgctttgatcagtttgtatat
aagctcagcgaacaaatttacgcgcatttcaagcatttagcggggagtattctcctagat
aaaaggtttcgtcaagagtgccaaaatgttggaacttccatttataaccctcctcctaat
agatatgttactctattaagacagcgtcatgttcaacttcttggacgctccattgaccta
aatcgtctcatatgtcaaagaatcaataatagcattcttaaatcattggatcttgcaatt
tctcgattcgaagcaggtgatatcacgggtgtggtcgaacttgaaaatttaataaaggcc
aataaattgactgtcaagttactcagtgaacatttatctcttgacgattttaattccctt
ttaagtgaggccaatagaaatgttttagccccatatgggcgtataacgttgcatgtattc
tgggagctcaattatgactttctcccaacttattgttacaatggtgccacaaaccgtttc
gtgaagtgtagggaaatatcttttactcaacatgtgcaaagagaaaaggctgcaaccatg
gctcaccattatctatgggggagcaaagcactcaatatagcaaataatactatttattct
cagtttacgggatttgttggtattccacactttcgaagtatagccagcctcttgggatat
caggggatagctgtggttatggaagaacttcttaagatagtaaagagtcttgtacaagga
aacattcttctgtttactaaaacactcatgaaagccatgccatatcaatgcaagttacca
agatatgactatggatctcctggtgtattagggtattatcatgcaaacttacaagacatt
gtccaatatcctgatgctagaactgagctcttccacaattttcgtgagtttggaaatgct
attctcttttgcatgctgatggaacaagctctttcacaagaagaggtgatggatcttctt
catgccgcgccttttcaaaatattcttccaagaccacattgtaaagaaggtgaaaaacca
gaagtgaaacaaaaaagactggaagtaaaatatgctgctcttcaaattgttacaaatatt
gacaagtttggaaatgccaagcaggcccaaattgctcgtgaaggtgaccttctcactagg
gagagactttgttgtggtctatccatttttgaagttattctaaatcgtgttaaaggctat
ttagatgatcccatatggcatggaaaagcacctggaaatggagtgattaacattgacgaa
tgcactgaatttcatcgtctttggtcagcattacaattcgtttattgtatacctttagga
ctgaacgagtttaatgtagagcaaatgtttggagagggactaaattgggctggctgtgtg
ttaatagttttactaggacagcaaaggagatttgaatgtttggatttttgttatcacata
tttagtgtacatcgtgtagatgggaaggatgatagtgtcaaaggaatccaagttaagcga
atggtggataggatacgacgatttcaagttttaaactctcagatattcgcaactcttaac
aagtatttgcgaacgtcttctgatgcggataatctgcctgctgagcatgttcgttgtttc
caacctccaattcatcaatcattagccaatgcaagtgactatgggacgtatagatcctaa
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