KEGG   Lepeophtheirus salmonis (salmon louse): 121118676
Entry
121118676         CDS       T08214                                 
Symbol
Rab1
Name
(RefSeq) ras-related protein ORAB-1
  KO
K07874  Ras-related protein Rab-1A
Organism
lsm  Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:lsm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    121118676 (Rab1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsm04131]
    121118676 (Rab1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lsm04147]
    121118676 (Rab1)
   04031 GTP-binding proteins [BR:lsm04031]
    121118676 (Rab1)
Membrane trafficking [BR:lsm04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    121118676 (Rab1)
 Autophagy
  Other autophagy associated proteins
    121118676 (Rab1)
Exosome [BR:lsm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121118676 (Rab1)
  Exosomal proteins of other body fluids (saliva and urine)
   121118676 (Rab1)
  Exosomal proteins of colorectal cancer cells
   121118676 (Rab1)
GTP-binding proteins [BR:lsm04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    121118676 (Rab1)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA SRPRB CPT AAA_22 AAA_7 AAA_5 ABC_tran AAA_16 FeoB_N AAA_29 Septin G-alpha PduV-EutP TniB
Other DBs
NCBI-GeneID: 121118676
NCBI-ProteinID: XP_040569199
LinkDB
Position
5:complement(9522147..9525403)
AA seq 201 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDRYACENVNKLLVG
NKCDLTTKKVVDYTTAKEYADQLNMPFLEASAKNATNVEQAFMTMAAEIKNRVGPPAPSG
PSGQVKIDSTPVSSKSGTGCC
NT seq 606 nt   +upstreamnt  +downstreamnt
atgaatccagaatacgattatttattcaagctgttattgattggcgattctggtgtaggc
aaatcgtgcttactattaagatttgctgatgatacttacacagaaagttacataagtaca
attggtgttgactttaagattagaacaattgaactcgacggaaagactatcaagttgcaa
atctgggatactgcaggccaagaaagattcagaactatcacatccagttactatcgtggt
gcccacggaatcatcgttgtatatgacgttacggaccaggattcttttaataaccttaag
caatggcttcaagaaattgatagatacgcatgtgaaaatgtaaacaagcttcttgtggga
aacaaatgtgatctgacaacaaagaaggttgtagattatacaactgcaaaagaatacgct
gatcagttaaatatgccgtttttggaagcctctgctaaaaatgcaaccaacgtagagcaa
gcttttatgactatggcagcggaaattaaaaacagagttggacctcctgctccctctgga
ccatcaggacaagtcaagattgattcgacccctgtttcatccaaatcagggactggatgt
tgctaa

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