Lepeophtheirus salmonis (salmon louse): 121118681
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Entry
121118681 CDS
T08214
Symbol
dom
Name
(RefSeq) helicase domino
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121118681 (dom)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121118681 (dom)
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
121118681 (dom)
SWR1 complex
121118681 (dom)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
Motif
Other DBs
NCBI-GeneID:
121118681
NCBI-ProteinID:
XP_040569204
LinkDB
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Position
5:50768155..50772849
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AA seq
1378 aa
AA seq
DB search
MESGLLRRSTRYSQESNYGEEEDEEEEEEEDDDDDEEEQDSFTRAASEKLIEKIEEKKGY
LERLKQELKSLKKEPFVIPDESEEEKEARILNRIQQLKKSSLWFTFEPKKRMDPSLKKPK
VHWDFVLEEMSWLSSIFQQEMKAKKLGAKKCAKMVQKHFSDKALSVARAEKAHEQHLKKL
ASFQAKEIREFWSNVEKFFEFRLQKRIEYMRKKALDEHLNFIVDKTEKFSNMLAESLAQD
ISSPSLKNEQQSKMIQESESAPEKYEKEYRPDSSSEDDEETIAMDEKDHGQDEEELNKLK
KESEIPIEELLRKYYSDQQASNSESEEKDKVMEVEKNDESEQVVKKEKSKEVVSKMEEKD
VEEVDNNYSKSDIISSPKDETSHDKKKENKVEEEEEEREYTLERLMNEEESDSDFNNVIA
MAAKFQPTGNTLATTNVKTPIPFILKHSLREYQHIGLDWLVTLQERKLNGILADEMGLGK
TIQTIAFLAHMACEKQLWGPHLIVVPTSVLLNWEMEIKKWAPSFKVLTYYGSQKERRLKR
IGWTKPNAFHICITSYKLVIQDHSSFRRKKWHYFILDEAQHIKNFKSQRWQMLLNFASDG
RLLLTGTPLQNNLMELWSLMHFLMPHVFESHRDFKEWFSNPLTGMVEGSAEYNDGLIKRL
HKVLRPFLLRRLKNEVEKQLPKKYEHIIRCGLSNRQRYLYDDFMSRTKTKETLETGNFLS
VINILMQLRKVCNHPNLFEPRPTVSPFVDFVVQLDIPKLALRDRIRNLAVDFAYHPILLT
PHEFTSSAYSSFRANQLKMNKLQYPVHTASVPIAKLQFTIKNELQSNNNQNISYIDANSL
LNNNVWLKNYEKDHELSVKIKRGSYAVHPCEVASKVPRVELEDPLFDYESSIKTNGDVEV
EEIDYPSSKRGIFSSPLFDTDVDFPPLDSFKKKKSINFERQYDFRSRLNCLKCETNPVYG
TDLIDAVRFISADAFSFPKISMMVPGDNEKLIHKYPHFPETNLETVERLKPFFDYFMLYI
PHCLSIKPLEHTSNEDVIKDDSLNGTASLQNNLMCRPFNLLLPETRLIQYDCGKLQRLKT
ILSNLRADNSRVLIFTQMTKILDILEIFLNYLGYIYLRLDGSTKVEQRQILMERFNGSKK
YFCFILSTRSGGVGINLTGANAVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLVSEK
TIEENILKKANQKRLLGDLAIEGGSFTTATLKKQTIRDLFDVNDETVSGTQVTEEDHSSS
SRVSARAVGVFENAISAVEDDSDIQALKSATKEFAEDQAEFDETETSEKNEMEELIKSIL
DQLTSLERYALSHIEKMEKEWQDEQIAQAKAEIEEQKRELNSKKIEELSDESSEEDDE
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtggattacttcgtaggagtactcggtactctcaggagagtaattatggagaa
gaagaggacgaggaggaagaagaagaagaagatgatgatgatgatgaagaagaacaagat
tccttcaccagagccgcttccgaaaagttaatcgaaaaaatagaggagaaaaaaggttat
ttggagcgactgaaacaggaattgaagagcttgaagaaggaaccgttcgtgattccagat
gaatccgaagaggaaaaagaggctcgtattttaaaccgtattcaacagctcaaaaagagc
tcactttggttcacttttgagcccaagaaacgaatggacccctcgttgaagaagccaaaa
gtccattgggatttcgtccttgaagaaatgtcgtggctctcaagcatttttcagcaggaa
atgaaagccaagaaattaggagctaagaaatgtgcaaaaatggtccaaaaacacttttca
gataaggctctaagtgtcgcaagagcggaaaaagctcacgaacaacaccttaaaaagtta
gcgtcttttcaagctaaagaaattcgggagttttggtcaaatgtcgagaagttttttgag
tttcgattacagaagcgtattgagtatatgcgtaaaaaagctctggatgaacatctcaat
ttcattgtggataaaacggaaaagttttccaatatgttggcagaaagtttggcacaagac
atttcttcaccatcacttaaaaacgagcagcagtccaagatgatccaagaatctgagagt
gctcctgaaaaatatgagaaggaatatcgtcctgattcttcttccgaagatgatgaagaa
actatagcaatggacgaaaaagatcatggacaggacgaagaggagttgaacaagctcaaa
aaagagtctgaaatacccattgaagaattactccgtaagtattattcggatcagcaagca
tcaaattctgagtcagaagagaaagacaaggttatggaagtcgagaagaatgacgaaagt
gaacaagtggtcaagaaagagaaaagtaaagaagttgtatccaaaatggaagaaaaagat
gttgaagaagttgataataattattcaaaatctgatataatttcttctccaaaggacgaa
acttctcatgacaagaagaaggaaaataaagtcgaagaagaagaagaagaaagagagtat
acattagaacggttgatgaacgaggaagaatcagatagtgattttaataatgtcattgca
atggcggccaagtttcaaccaacaggaaacacacttgcaacaaccaatgtgaaaacacct
atacccttcattctcaaacatagtcttcgagagtatcaacatatcggcctagattggtta
gtaactcttcaggaacgtaaattgaatggaatccttgccgatgaaatgggcttgggaaag
acaatacaaacaattgcctttttggctcatatggcatgtgaaaaacagttatggggtcca
catttaattgttgttcctacttcagtgctattgaattgggaaatggaaataaagaaatgg
gctccgtcttttaaggttttaacctattatggttctcaaaaagagagacggttaaaaaga
ataggatggactaaacccaatgcctttcatatttgtatcacctcgtacaaacttgtcatt
caggatcattccagttttagaagaaaaaagtggcactattttatattagatgaagctcaa
catataaaaaattttaaatctcagcgttggcaaatgttattgaattttgcgagtgatggt
agattactactaacaggtactccattgcaaaacaatttgatggagctttggtccttaatg
cactttctcatgccccatgtatttgaatctcatagagattttaaggagtggttttcaaac
cctttaaccggtatggttgaaggcagtgcagagtacaatgatggcttgatcaaaagactg
cataaagtgttgagacctttccttttgagacgcttaaaaaatgaggtggaaaaacaactt
cctaaaaaatatgaacatataatccgttgtggactctctaatagacaacgctatctctat
gatgatttcatgtcacgaaccaagactaaagagacacttgagactgggaactttcttagt
gtaattaatattttaatgcagcttcgaaaggtttgtaatcatcctaatttatttgagcca
cgacctactgtctctccctttgtggattttgttgttcagttagatatacctaaacttgct
cttcgtgatcgaattcgtaatttagcagtcgactttgcatatcatccaattttattgact
cctcatgaatttacttccagtgcatactcttcatttagagccaatcaattaaaaatgaat
aaattgcaatatccagtgcacactgcttctgttccaatagccaagttgcagttcaccata
aagaatgagcttcaaagtaataataatcaaaatattagttacattgatgcaaactcactt
ctcaacaataacgtttggcttaaaaactacgaaaaagatcatgagctctctgtcaaaatt
aaaagaggttcatatgctgttcatccatgcgaagttgcatctaaagttccacgggtcgaa
ctagaagatccactttttgattacgaatctagtattaaaacaaatggagatgttgaggta
gaggagatagactatccgtcatcgaagagagggattttctcatcccccttgtttgacact
gacgtggacttccctcctttagattcttttaagaaaaaaaagtcaattaatttcgaacgt
caatacgattttcgatctcggcttaactgcttgaaatgtgaaactaatccagtgtatggc
actgatttaattgatgctgtacgttttatatcagcggatgccttctccttccctaaaata
tccatgatggttccaggggataatgagaagctgattcataaatatccacattttccagaa
actaacttggaaactgtagaacgtctcaaacccttttttgactattttatgttgtatatc
cctcattgcttgagtataaagccactcgagcatacttctaatgaagatgtgataaaagat
gactccttaaatggcactgcatctctacaaaataatctcatgtgtaggccttttaattta
cttcttccagagactcgtttgatccagtatgactgtggaaagttgcaaaggttaaaaaca
attcttagtaaccttagagcagataatagtcgtgtcttgatatttactcaaatgacaaaa
attcttgatatattagagatattcttaaattatcttggctacatatacctaagactcgat
ggatccaccaaagtagagcagcgtcaaatacttatggaaaggtttaatggaagtaaaaag
tacttttgctttattctttctactcgatctggaggtgtaggaatcaatttaactggtgcg
aacgctgtgatattttacgattcagactggaatcctacgatggatgcacaagctcaagac
cgttgtcatcgtattggacaaactcgtgatgttcacatttatagacttgttagtgaaaaa
acaattgaggaaaatattcttaaaaaagcgaatcaaaaaaggttgttaggggatcttgcg
attgaaggcggtagttttactacggccactctaaagaaacagacgattagggatcttttt
gatgtaaatgatgaaactgtgtctggtacacaagttacagaagaagatcattcatcatca
tcccgagttagcgccagagcggttggtgtttttgaaaatgcgatttccgctgtggaagat
gattcagatattcaggccttaaaatcagcaaccaaggagttcgctgaagatcaggcagaa
tttgatgaaacagagacatccgagaaaaatgaaatggaggagcttattaagtcaatattg
gatcaactcacttcacttgaacgctacgcgctttctcatattgaaaaaatggaaaaagag
tggcaagatgagcagatagctcaagccaaagctgaaatagaagaacaaaaacgggagctt
aattctaaaaagattgaagagttatcggatgagagtagcgaagaagatgatgagtag
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integrated database retrieval system