Lepeophtheirus salmonis (salmon louse): 121118798
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Entry
121118798 CDS
T08214
Symbol
hrg
Name
(RefSeq) poly(A) polymerase type 3
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121118798 (hrg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121118798 (hrg)
Enzymes [BR:
lsm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
121118798 (hrg)
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
121118798 (hrg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
DUF5661
Motif
Other DBs
NCBI-GeneID:
121118798
NCBI-ProteinID:
XP_040569316
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All DBs
Position
5:complement(20124664..20128072)
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AA seq
593 aa
AA seq
DB search
MNENSGSMTTGITPPISLAFPESGDVERTVLLKESMEPYGVFDTGDELNHRMAVLSRLNV
LVKEWIKEVSLEKNMPLNLAETVGGNVYTFGSYRLGVHNRGADIDALCVAPRHILREDYF
SSFVDKLRAQPEVSELRSVPEAFVPVIKMNFDGIEIDMTFARLALKEVTDNQTLGDPILL
KNLDPKCVRSLNGCRVTDEILNQVPNKDTFRLTLRGIKLWAKRHGIYSNVLGYLGGVSWA
MLVARVCQLYPNADASQLIQKFFLVFSNWQWPQPVLLKKPEDVGLGFPVWDPRLNVSDRF
HHMPIITPAYPQQNSTFNVSRSTLEIMKAEFKSSRQICDDLVVGRVNWDKLFETPNFFAK
YRHFIVLEASSSSEEDQLEWYGLVESKVRHLVGNLERESIELAHVWPKTYPSQVKGQEKT
CCYWFIGLIIKNVVEQNHLDLTTPIRNFTDIVMRSAHTIKMWKDGMKVEACYKRRKQLAK
YLPPNERYKLKSERKSLPSSLTNSPAANHDESSRDSVKKRVVSSSEAENSNLNDEQGTVD
DTEDATGVTNNENDSNSKDISSSPSTEDKNVVQPPLKRTKTSEIELRNGLQIS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagaacagtgggagcatgacgacgggaatcactccgccgataagtttagccttc
cccgaatccggggacgtggaaaggacggtcctcctgaaggagtcgatggagccctacggc
gtgtttgacactggggatgagttgaatcaccgaatggccgttctgagtcgcctcaacgtg
ttagtgaaagagtggatcaaggaagtgagcttggagaagaacatgcccctcaatttggcg
gaaacagtgggggggaatgtgtacacgttcgggtcctaccgcctaggagtacacaaccgc
ggagcagatatcgatgcgctctgtgtggcccccagacacattttgagggaggattacttc
tcctccttcgttgataaacttcgagcccagcccgaagtctcagagttgagatccgttcca
gaagcattcgttcctgttattaaaatgaactttgatggcattgagatcgatatgacattt
gcgagactggctctcaaggaagtcacagataatcaaacgctcggtgatcctatactgctc
aaaaatttagatcccaagtgtgttcgcagccttaatggatgtcgtgttactgatgaaatc
ttaaatcaagttccaaataaagacacttttcgcctcactctcagaggtatcaaactatgg
gccaagagacatggtatatacagcaacgttcttggttacctgggaggggtgtcttgggcc
atgttagtggcacgagtttgtcagctgtatcctaatgcggatgcttctcaactcatacaa
aagttctttctcgttttttcaaattggcagtggccacaaccagttctattgaaaaagccg
gaagacgtgggccttggtttccctgtctgggatccaagacttaatgtctcggatcgtttt
catcatatgccaattataactccggcttatccacagcaaaattcaacatttaatgtatct
aggtcaactctagaaattatgaaagcagagttcaaatcatccagacagatatgtgacgac
ctcgttgtgggaagagttaattgggataaactttttgaaacgcctaatttcttcgcaaag
tataggcatttcatagtgttggaggctagttcttcctctgaggaagatcaattagagtgg
tatggtcttgttgagtcaaaggttcgtcatttagtcggaaacttggaaagagaatcaata
gagctggctcatgtttggccaaaaacttatccttcacaagtcaaaggacaagagaaaacg
tgttgttattggtttattggacttattattaaaaatgtagtggaacaaaatcatttagat
ctcacaactcctattagaaactttacagacattgttatgcgctcagcgcacacgattaaa
atgtggaaggacggaatgaaagtcgaggcttgttacaaaaggcgaaaacagctagccaaa
tatctacctcctaacgagaggtataaattaaaatcggaacgcaagtccttaccttctagt
ttaactaattcacccgccgcgaatcacgatgaatcgtctagggatagtgtgaaaaaacgg
gttgtatcatcatcagaagcagaaaattctaatttaaacgatgaacaaggaactgttgat
gatactgaggatgccaccggtgtaactaacaacgaaaatgacagcaactccaaggacatt
tcatcttctccttcgactgaggataagaatgtggttcaacctccactaaagaggaccaag
acgtccgaaatagaacttaggaatggacttcagatttcgtaa
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