Lepeophtheirus salmonis (salmon louse): 121118845
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Entry
121118845 CDS
T08214
Name
(RefSeq) DNA-binding protein RFX2
KO
K09173
regulatory factor X 1/2/3
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121118845
Transcription factors [BR:
lsm03000
]
Eukaryotic type
Other basic domains
RF-X
121118845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
121118845
NCBI-ProteinID:
XP_040569376
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All DBs
Position
5:6196287..6200295
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AA seq
697 aa
AA seq
DB search
MNSDGSILEDISTNGLNCESELASRNEVESLSKITSKSPNGSIADASYIGEVEEGQNPHS
ITLNAPEFCSTFSPEEDVSGASAFSTALVNNDSGEYSNIFTAINPLQHTRYDHLSIVDNS
CTYTNLEDSLHRREVGYNESTIATITLPSPDSQHILSNDLSSKKNDHSRLVLSKHMDSPS
NAYVESDSDFQTINSDFESNSTNMSHATRVSPATIEWLVLNYETSEGVSIPRSTLYQHYQ
DHCRESQQEPVNAASFGKLIRSVFLGLRTRRIGTRGNSKYHYYGIRVKSKSGLSVKFKET
DFQLIAPPMKKRCQNSFITTSLKTDQSNITLLNTISTDAFMSTCGNNNHFIQYFDITDNF
TIDHFPNLHILKEQLPAGLCESDVSSFESIYYQYCLKILKLVQNGEFNEIEEILMDFWPS
NSSGSKCFMDQMSELKLIKLQFNSLFNILAIQQYIQEADLTCYQKIVDIVVPNVLLDIPG
SLTQILRNFGKNMETWMKNSLVEVNPELIKMKMSCIKSLNLCLKRYTGLNHLAQATRAVL
ANSSLIQQMDEDLSKIDFDSVRENCGWICDCNSSIVKLFEEEFKSTLKREVDLETWAKWL
EDVIDPFLGGQKENSKYFKASRQFLLRWSFYSSMVLRDLTLRSALSFGSFHLIRLLFDEY
LHYAVEKRVAAKLKTVPMALVIGLQDEEARESHDFLE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaactctgatggatccattctggaagatatttccactaatggactcaattgtgaatcc
gaattagcatcacgaaatgaggttgaatccctctccaaaatcacctctaaatctccaaat
ggctctattgcagatgcttcctacattggtgaagtagaagaaggtcaaaatccccattcc
atcacactcaatgctcccgaattttgctcaacctttagcccagaagaggatgtaagcgga
gcatcagctttttcaacggcattggtcaacaatgactctggagaatattctaatatcttc
acagcaataaatccacttcagcacacaagatatgatcacctgtcaatagttgataactcc
tgcacctatacaaatctagaggatagcttacatagacgtgaggtgggatacaatgaatcc
accatagccactattactctaccctccccagattcccaacacatactctcaaatgactta
agctcaaaaaagaatgatcactcacgattggttttgtcaaagcacatggattctccttcg
aatgcctatgttgaaagtgatagtgattttcagacaatcaactcggactttgaatctaat
tctacaaatatgagtcatgcaactcgagtgtcaccagctacaattgaatggttggttctc
aactatgaaacatctgagggtgtaagtattcctcgctcaaccttatatcaacactatcag
gatcattgtcgagaatcacagcaggagccggttaatgctgctagttttggtaaattgatc
cgctcggtttttttgggtttgagaacgagaagaataggtactagagggaattcaaaatat
cactactatggaatccgtgtcaagtcaaaatccggactgagtgtaaaatttaaagaaact
gactttcaactcattgctcctcctatgaagaaacgctgtcaaaattcttttataaccaca
agcctcaagacggaccaatccaatataactcttttaaatacaatatcaacagatgcattc
atgagtacgtgtggaaataataatcactttatccaatactttgacatcacggataacttt
acaattgatcattttccaaatttacacatactcaaggagcaacttcctgcgggactttgt
gaatccgatgtgtccagctttgagtcaatatattaccaatattgcctcaaaatcttaaaa
cttgtacaaaatggtgaatttaatgaaattgaagaaatattaatggatttttggccatca
aatagctctggctccaagtgtttcatggatcaaatgagtgaattgaagttaatcaagtta
caattcaactctttattcaatattttagcaattcagcaatacatccaagaggcagatctc
acatgctatcaaaaaatagtagatatagttgttccaaacgttctcctagatattccagga
tcactaacacaaatactccggaattttggtaaaaacatggaaacttggatgaaaaactct
ttagtggaagtcaatccagagctaattaaaatgaaaatgtcatgtatcaaatccttgaac
ctatgtttgaagcgatatacaggattgaaccacctagcacaagccacacgtgcagttctg
gcaaatagctccttaattcaacaaatggatgaggacttgagtaaaatagatttcgattcc
gtacgggagaattgtgggtggatatgcgattgcaattcgagtattgttaaattatttgaa
gaagaatttaagagtactctaaagagggaagttgatttagaaacttgggctaaatggttg
gaggatgtaattgatcctttccttgggggtcaaaaggaaaattccaaatatttcaaagca
tcaaggcaattcttacttcgatggtccttctatagctcaatggtattaagggatttaaca
cttagatccgcattaagctttggctcttttcatctcatacgattgctctttgacgaatat
ctccactatgccgtcgagaagagagttgctgcaaaattaaaaaccgtaccaatggcactc
gtgataggtcttcaagacgaggaagccagagagtctcatgactttttggaatga
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