Lepeophtheirus salmonis (salmon louse): 121118869
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Entry
121118869 CDS
T08214
Name
(RefSeq) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121118869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121118869
Enzymes [BR:
lsm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
121118869
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121118869
Prokaryotic type
121118869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
121118869
NCBI-ProteinID:
XP_040569398
LinkDB
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Position
5:55290431..55292049
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AA seq
283 aa
AA seq
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MPGVTKNIKTYFKPVNSPLKRKSDVSQTTPDQKKRMAQNRFASKIILESKNFPILDREMG
SSWFEALELHFKKDSFKRLNDFIVKEREGSKKIFPKEENVWSWTKFFPISETKVVILGQD
PYHGPSQAHGLCFSVLPGIRPPPSLLNMFKELEQDIPDFKRPNHGYLSGWASQGVLLLNA
VLTVRQAEANSHKDKGWEQLTDAVIQYISDNCDGVVFLLWGSHAQKKGGIVNKNKHHLLK
SVHPSPLSAHRGFLGCKHFSKANEILKEQGKVPIDWTHLPQDI
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcccggtgtaactaaaaatatcaagacatatttcaagccagtgaattctcctttgaag
aggaagagtgatgtttctcaaactactcctgatcagaagaagagaatggctcaaaaccga
tttgcatccaagattattctcgagtctaaaaactttcctattttagatagagaaatgggc
tcatcttggtttgaggctcttgagcttcactttaaaaaagactcatttaaacgattaaat
gattttatcgtcaaagaacgagaaggatcaaagaaaattttcccgaaagaagaaaatgtc
tggagttggacaaagtttttccctatttctgagacaaaagttgttattttaggtcaagat
ccttatcatggtcctagtcaagcacatggtctatgtttctccgtcttacctggaattcga
ccccctccttctcttctcaatatgttcaaggaactggagcaagatattcccgactttaaa
agaccgaatcatggttatctctctggatgggctagtcaaggagttcttttactcaatgcc
gttctcacagtacgccaagccgaggcaaattcccacaaagacaagggttgggaacaacta
acggatgctgtgattcaatatatttcagataactgtgatggtgttgtctttcttttgtgg
ggttctcatgctcagaaaaaaggtggaattgtcaacaagaataagcatcatttattgaag
tctgttcatccctcgcctctttcggctcataggggttttttgggatgtaagcatttttct
aaagccaatgaaatcttaaaagagcagggaaaagtaccgattgattggactcatcttcct
caagatatttag
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