Lepeophtheirus salmonis (salmon louse): 121118897 Help Entry 121118897         CDS       T08214                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19719   collagen type II alpha Organism lsm  Lepeophtheirus salmonis (salmon louse) Pathway lsm04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:lsm00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     121118897  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:lsm00536]     121118897 Glycosaminoglycan binding proteins [BR:lsm00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    121118897 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  121118897 NCBI-ProteinID:  XP_040569429 LinkDB All DBs Position 1:complement(19039420..19046349) Genome browser AA seq 1494 aa AA seqDB search MIFKIQSIGASYTHLGILAMLLVLASKESRAGPDPKPGPQDPSEAYPYEDYDGAYGTDYG EYGSYPDTLDEQNPPDENLTPTRDSYDRSANSQDECAGVVCPEMNCDSPPYIPLGECCPV CPGGGAPNGDNSYNQPPSEQTTTNPPPLSNQGARGDSGRSGSPGTPGLPGTPGVPGMPGP PGPQPDIQPFLNQVQESQGGQKGPSPDPFSYMQAQVGPVGPRGAPGGQGPPGPQGFMGPQ GEGGDPGIRGSAGPPGPRGLPGLTGKEGEGGQDGEPGPMGPSGPPGKRGLPGMPGLPGPK GHRGFPGLDGAKGNVGSSGEKGEDGAPGPMGPSGPMGPAGPRGERGREGPPGAPGLRGID GITGPPGEPGSIGKSGPPGFPGIPGAKGDMGSVGPKGSPGLQGPRGESGKPGGPGQSGKM GPPGKDGVNGEKGSPGSPGAHGPPGFPGPRGKPGLNGSPGPPGPKGLSGSPGSDGPKGES GMKGEMGQMGPRGLPGPTGPAGRRGSRGIRGPSGPPGPLGEPGPPGGRGLPGSDGPAGPK GQSGDRGSPGPLGPKGKHGDIGRPGAVGLQGLRGAPGRRGPIGRPGSPGKRGDPGADGKN GDIGPQGLQGLPGPPGNMGDKGPRGEPGQEGNPGMHGPPGPRGDAGKDGLEGPQGPIGHA GSPGERGSPGPSGSRGFQGIPGEPGKPGQPGKDGEAGLPGPSGMMGDQGKQGARGFPGER GSLGPPGPPGVRGETGGTGSDGPPGINGPKGSPGRKGPPGLVGLPGKRGISGPAGVKGER GSPGKPGPEGPQGKIGDRGPQGTIGPIGRPGEVGSPGDHGPPGPAGEPGATGMMGERGPS GPQGLAGFPGPPGIPGPSGSKGSRGFPGGKGLQGNPGPAGGPGEPGPPGLTGLMGAKGSR GESGPRGESGMMGPPGRPGQAGLNGEPGRQGTSGPPGLHGIKGSSGSRGAEGKRGNPGAP GMPGPEGQKGGVGADGPPGPSGPPGPGGPPGDRGSPGLPGPTGPIGARGPQGSQGERGES GKPGKEGPIGPQGLLGPPGPSGERGERGEEGPMGKPGAPGIGGRPGDKGPPGSAGLMGSP GGPGIPGPPGKTGPSGPTGERGERGSIGPAGVIGPPGMIGKTGPPGLQGPPGLDGGSGAK GSKGHRGLIGLQGLTGPSGPPGDKGPRGESGTNGKPGEPGPRGPPGLDGAIGPPGLLGAP GPRGSQGEEGKRGLPGERGGPGPPGPPGESSGYDAAALTALLGQTSSKGPDPLSSDEPVR MFGGDISHADQKKLVISAYKKLKESFEKFATPDGGKETPAKTCRDLKIAHPDKPSGEYWI DPNSGDPKDSILVHCDMETSSSCIYPKPEMSEEMWHITTERETWFSEIPKLGFGLTYKAD SNQLNFLQMLSSSAVQNVTYHCSNSVAYYNAKRNNYRKAVALMTWNDLELRHRGRFKYDV PIDECKHDRKDWAFTTFTVRTNKPARLPIVDVAIRDIGNENKKFKLEVGPVCFS NT seq 4485 nt NT seq  +upstreamnt  +downstreamnt atgattttcaaaattcaaagtattggagcgtcctacacgcacctgggaatacttgctatg ttactagtcttagcatcaaaagaatcaagagcaggcccggatccaaagcctggaccccaa gatccaagtgaagcatacccatatgaagactacgacggcgcttatggaactgattatgga gaatacggatcatatccagacactttggatgagcaaaatccaccagatgaaaatcttacc cctactcgggattcatacgatagaagcgcgaacagtcaagatgaatgcgctggagttgtg tgtcctgaaatgaattgtgattctccaccttatataccacttggagaatgttgtcctgtc tgtccaggaggaggagctccaaatggagataatagttataatcaacccccatcagaacaa acaactacaaacccaccaccgttatcgaaccaaggagccagaggagattcgggaagatcg ggaagtccaggaacaccaggattgcctggaactcctggcgtaccaggaatgcctggaccc cctggacctcaaccggatattcaaccattcctcaatcaagttcaagaatctcaaggagga caaaaaggaccttctccagatcctttttcatacatgcaagctcaagttggacctgtcgga cctagaggagcgccaggtgggcaaggacctcctggaccgcaaggtttcatggggcctcag ggagagggcggtgatccaggtattcgtggatctgcaggacctcctggtccaagagggtta ccgggcttaaccggtaaagagggggaaggaggacaagatggcgaaccaggaccaatggga ccaagtggtccacctggtaagcgaggcttaccgggaatgcctggattgccaggtcctaaa ggacatagaggatttccaggtttagatggagcaaaaggaaatgttggatcatccggagaa aaaggagaagatggagcaccaggacccatgggaccatcagggcctatgggtcctgcaggc cctcggggagaaagaggaagagaaggtcctccaggagcaccaggtcttagaggtattgat ggtataactggacctccaggagaaccaggttctattggaaaaagtggtccacctggattc cctggtattcctggagcaaagggtgacatgggttctgttggtcctaaaggtagccctggt ttacagggaccaagaggtgaatctggaaaaccaggtggtcctggccaatctggaaaaatg ggacctcctggaaaagatggagtaaatggagaaaagggaagcccaggatcgcctggtgct catggacctccaggattcccaggacctagaggaaaaccaggtctcaatggaagccctggt ccaccaggtccaaaaggattaagtggttcacctggatctgatggaccaaagggagaatct ggaatgaagggtgaaatgggtcaaatgggtcctagaggcctaccaggacctactggtccc gctggaagaagaggaagtagaggtatcagaggaccatctggaccacctggtcctcttgga gagcctggtccacctggtggcagaggattacctggatctgatggacctgctgggcctaaa ggtcaatcaggagatagaggatctccaggacctttgggaccaaagggaaaacatggagat attggcaggccaggagcagttggtctacaaggtttacgaggagccccaggaagaagaggc ccgattggaagacctggatcacctggaaaaagaggtgacccaggtgcagatggaaagaac ggtgatatcggtcctcaaggtttgcaaggtttacctggacccccaggtaatatgggagac aaaggtcctcgtggtgaaccaggacaagaaggaaatcctggaatgcatggacctcctggt cccagaggagatgctggaaaagatggtcttgaaggacctcagggtcccataggacatgct gggtcaccaggagagagaggatctccaggtccttcaggaagtaggggttttcaaggtatt cctggggaacccggaaaaccagggcaaccagggaaagatggagaggctggattacctggt ccatcaggaatgatgggagatcaaggaaaacagggagctagaggctttccaggagagaga ggatcattaggaccgcctggtccacctggagttagaggagaaactggaggaacaggatcc gatggacctccgggtataaatggacctaaaggctcacctggaaggaaaggtccccctggt ctcgttggattaccaggaaaaagaggaatatcaggacctgctggagtaaaaggtgaaaga ggaagtccaggaaaacctggacctgaaggcccccaagggaaaattggagatagaggacct caaggtacaattggtcctattggacgtccaggagaagttggaagccctggtgatcatggg cctcctggacctgctggagaacctggagccactggaatgatgggagaaagaggaccatct ggtcctcaaggtttggcaggatttcctggacctccgggaattcctggaccatcaggatca aagggttctagaggattccctggaggaaaaggacttcaagggaatcctggacctgcaggt ggacctggagaaccaggacctccaggattaactggtttaatgggagccaaaggttcaaga ggagagtctggaccaagaggagagtcaggaatgatgggacctcctggaagacctggacaa gcaggattaaatggcgaacctggtagacaaggtacttctggacctccaggacttcatgga attaaaggttcatcaggatctagaggagctgaaggaaagcgaggcaaccctggagcacca ggaatgcctggccccgaaggacaaaaaggaggagtcggagctgatggaccaccaggtcca tctggaccccccggaccaggtggacctccaggtgatagaggatcacctggcttacctgga ccaacagggccaattggagctagaggaccacaaggatctcaaggagaaagaggcgagtct ggaaagcctggaaaggaagggccaattggacctcaaggattgcttggacctcctggacca tcaggagagcgtggggaacgaggtgaagaaggcccaatgggcaaacctggagcaccaggt attggcggaagacccggtgataagggtcctcctggctcagctggtctaatgggatctccc ggcggaccgggtattcctggacctcctggtaaaacaggaccatctggaccaactggagag agaggagaaagaggtagtattgggcctgctggtgttattggaccacctggtatgattgga aaaactgggcctcctggattacaaggaccccctggattggatggaggcagtggtgctaaa ggatcaaagggtcacagaggtctaattggtctacaaggtttaactggaccgagtggtcct cctggagacaaaggacctcggggagagtcaggaacaaatggaaagccaggtgaacctgga ccacgtggaccacctggtttagatggtgctattgggcctcctggtcttttgggagctcct ggtccaagaggttctcaaggtgaggagggaaaacgaggtcttcctggagaaagaggaggt cctggacctccaggtccccctggtgaaagttctggatatgatgcagctgcattgactgcc ttattaggtcaaacttcatctaagggcccagatcctctgagtagtgatgagcctgttcga atgttcggtggagatatttcccatgctgatcaaaagaagttggtcatttctgcatataag aagttgaaggaatcttttgaaaagtttgcaacacctgatggaggaaaagaaacaccagcc aaaacctgtagagatcttaagattgcacaccctgataaacctagtggagagtattggatc gatcctaactctggggatcccaaagattcgattcttgttcattgtgatatggagacatct tcctcttgtatttatccaaaaccggaaatgagtgaggaaatgtggcatattacgactgaa agagagacttggttttcagagataccaaaattgggatttggactaacttataaagcagat agtaatcaacttaactttttgcaaatgttgtcctcatctgcagttcagaacgtcacgtat cattgttccaattcagtggcttactataacgccaaaagaaataactacagaaaggctgtt gcactcatgacctggaacgatcttgagcttcgtcataggggcagatttaagtatgatgtt cccattgatgaatgtaaacatgacaggaaagattgggctttcaccacctttactgtcaga accaacaaaccagcacgtcttcctatagtggatgtagccataagggacattggtaacgaa aataagaagttcaaactggaggtcggaccagtttgtttctcttaa

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