Lepeophtheirus salmonis (salmon louse): 121118964
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Entry
121118964 CDS
T08214
Symbol
Hsp60A
Name
(RefSeq) heat shock protein 60A
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121118964 (Hsp60A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121118964 (Hsp60A)
03110 Chaperones and folding catalysts [BR:
lsm03110
]
121118964 (Hsp60A)
03029 Mitochondrial biogenesis [BR:
lsm03029
]
121118964 (Hsp60A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsm04147
]
121118964 (Hsp60A)
Enzymes [BR:
lsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
121118964 (Hsp60A)
Messenger RNA biogenesis [BR:
lsm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
121118964 (Hsp60A)
Chaperones and folding catalysts [BR:
lsm03110
]
Heat shock proteins
HSP60 / Chaperonin
121118964 (Hsp60A)
Mitochondrial biogenesis [BR:
lsm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
121118964 (Hsp60A)
Exosome [BR:
lsm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121118964 (Hsp60A)
Exosomal proteins of other body fluids (saliva and urine)
121118964 (Hsp60A)
Exosomal proteins of breast cancer cells
121118964 (Hsp60A)
Exosomal proteins of colorectal cancer cells
121118964 (Hsp60A)
Exosomal proteins of bladder cancer cells
121118964 (Hsp60A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
121118964
NCBI-ProteinID:
XP_040569505
LinkDB
All DBs
Position
5:complement(3688233..3690410)
Genome browser
AA seq
578 aa
AA seq
DB search
MLGSMRFWSSGRQLSRLLRNDGMRTYSKDVRFGVDVKSELIKGMNILADAVSVTMGPSGR
NVVIESSWGAPKITKDGVTVAKAIELEDKFQNIGAKLVQDVASNTNDKAGDGTTTATVLA
RAIAKHGFDMVTRGANPVEIRRGLMMGVDVVTKNLMAMSKSVTSPDEIKQVATISANGDV
VIGELISEAMEKVGREGVITVKDGKTLEDEIEIIEGMKFDRGYISPYFINSSKGGKVEYN
DALVLFSEKKISSIQAIIPALELSNQMKKPLVIIAEDIDGEALTTLVINRLKLGLQVAAV
KAPGFGDNRKNTMADMAVATGGIVFGDEATDVKLEDVQLHDLGKVGEITITKDDTLLLKG
MGDEKSINKRIENIKLAIEDSTSEYEIEKMRERMARLSSGVALLKIGGSSEVEVNEKKDR
VNDALCATRAAIEEGIVPGGGTALLRCLDSLECAVTTNEDQQKGIEIIRQALKAPCLQIS
ENAGVDASVIVNKVIEASEKNIGYNAHSGEFVDMFEAGIVDPTKVVRTALADAAGVASLL
TTVEAVICEIPKNDPPSPGGMGGMGGMGGMGGMGGLGM
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgttgggatccatgagattttggtcaagcgggcgtcaattgtcccgtctcctacgcaac
gacggaatgcgaacctactcgaaagatgtccgcttcggagtggatgtgaagagtgagctg
ataaagggaatgaacatccttgcggatgcggtgtccgtgacgatgggacccagtgggcga
aatgtggtgattgaatcttcttggggtgccccaaagatcaccaaggacggagtgaccgtg
gccaaagcaattgagctggaagataagtttcaaaatattggtgctaagttggttcaagac
gtggcgagtaacacgaatgacaaagccggtgatggaacgacgaccgccacagtgttggca
cgtgccatcgccaaacatggatttgacatggtgacgagaggtgcgaatcctgtggagatt
cgtcgtggactgatgatgggtgtggatgttgtaacgaagaatttgatggcgatgtccaag
tctgtgacctctcccgatgagatcaagcaagtggctaccatcagtgccaatggggatgtg
gttattggggaactcatttctgaagccatggagaaagtaggacgggaaggtgtcatcacg
gtcaaggacggaaagactcttgaagatgaaatcgaaatcatcgaaggcatgaaattcgac
cgtggatacatttcaccttattttatcaattcctccaagggtggaaaagtggaatacaat
gatgcgctggtcctcttctcggagaaaaaaatatcaagtattcaagctattattcctgcg
ctcgagctttcaaaccaaatgaagaagcctcttgtcatcattgctgaggacatagatgga
gaagcactcacgactcttgtcatcaatcgtctaaaattaggtcttcaagtagctgctgtc
aaggctccaggattcggagacaatcgtaaaaacaccatggcagatatggctgttgccact
ggaggaatcgtttttggtgatgaggctactgatgttaaacttgaggatgtccaactccat
gatttgggaaaagttggagagattaccatcacaaaagatgacaccctcttgcttaaagga
atgggggatgaaaaatccattaacaagaggattgagaatatcaagttagcgatagaggac
tcgacttcagagtatgaaatcgaaaagatgcgtgagcgtatggctcgtctatcatctggt
gttgctcttctcaaaattggaggatcttcagaagtggaggtgaatgagaagaaagaccgt
gtcaatgatgcactttgtgctacccgtgctgccatcgaagaaggaatcgttcctggaggt
ggaactgctttattgagatgcttggattcccttgagtgcgctgtaaccacaaatgaggac
caacaaaaaggtattgaaatcattcgtcaagcgctaaaagcaccatgtctacaaatttcc
gaaaatgcgggtgtcgatgcctctgtcatcgtaaataaagttattgaggccagtgagaaa
aatattggttataatgctcactctggagaatttgtcgacatgtttgaagctggtatcgta
gatccaactaaagtagtaaggacggcccttgctgatgctgctggagttgcgtcgctgttg
acgactgtcgaggccgttatttgtgaaatcccaaagaatgacccaccatcacctggagga
atgggtggcatgggcggtatgggaggaatgggcggcatgggtggattaggaatgtaa
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