Lepeophtheirus salmonis (salmon louse): 121119000
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Entry
121119000 CDS
T08214
Symbol
alpha-PheRS
Name
(RefSeq) LOW QUALITY PROTEIN: phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121119000 (alpha-PheRS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lsm01007
]
121119000 (alpha-PheRS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsm03016
]
121119000 (alpha-PheRS)
Enzymes [BR:
lsm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
121119000 (alpha-PheRS)
Amino acid related enzymes [BR:
lsm01007
]
Aminoacyl-tRNA synthetase
Class II (U)
121119000 (alpha-PheRS)
Transfer RNA biogenesis [BR:
lsm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121119000 (alpha-PheRS)
Prokaryotic type
121119000 (alpha-PheRS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
Thioredoxin_16
PheRS_DBD3
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
OST-HTH
Motif
Other DBs
NCBI-GeneID:
121119000
NCBI-ProteinID:
XP_040569542
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All DBs
Position
5:complement(29851205..29854042)
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AA seq
741 aa
AA seq
DB search
MSELSERILQSLDSQNGILNSFNLSKNWKIDHQKIVGAVKSLEALPGYVNSVPITESYLE
LTEEGRKIVKDGSHEYFTHSSIPLEDGIPQKRTSGQSXSKVGFSKAMSLGWIVIDKSDPS
SILVRRKIPTVSDVTQEALKYLSKLNSKLKDELKKRKLLIEVVIKSYNLSKGPEFSLTIK
KGETDLTPEMIASGSWKETDFKPYNFNALGIQPTTGNLHPLMKVRAEYRQIFLEMGFKEM
PTNNFIESSFWNFDALFQPQQHPARDAHDTFFISDPAESSDFPKEYLEKVKKVHSEGGFG
SKGYGYDWSIHEAKKNLLRTHTTAVSARMLYQLMHDSKDEFKPQKYFSIDRVFRNETLDA
THLAEFHQIEGVIADRGLTLGDLIGILHEFFKKLGIEKLRFKPAYNPYTEPSMEIFSYHD
GLKIWVEIGNSGVFRPEMLLPMGLPEDVTVIAWGLSLERPTMIKYGIDNIRDLCGHKINL
KMVAKNPICRLDKDSRRPLANLLRVVDRRWTTIESVINQITKKYGISLDSVPVTIGNTNP
SSFVVFADPKYPPFSIVPIINSLKDQFFIRISLHVHSDTPTQIISNIHRDFFALFENKED
NTLNRPSISLKMVWKPIGMDSTLILNPLSSSPIKGEINLIRYFIRLMPNTQSHLFYYNEK
VTDFYLDYLHMNVGRSVSLSSKSMNLSCVNDFLTNIFIWSLACQKRLKLDEATKKNVSKN
IKRDEFIMQVMHHYKLENIVS
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagctttcagaaagaattcttcagtcacttgactctcaaaatggaatcctcaac
tctttcaatttatccaagaactggaaaattgatcatcaaaagatagtaggagctgtcaag
tctttggaagcacttcctgggtatgtaaactcagttcctataaccgaaagttatcttgaa
ctcactgaagagggtcggaaaatagttaaagatgggtctcatgaatacttcactcactct
tccattcccctggaagacggaattcctcaaaaaagaacttctggccaaagtnnaagtaaa
gtggggttcagtaaggctatgtccctgggttggatcgtcatagataaatccgatccgtca
agtatccttgttcgcagaaagatccccacagtttctgatgtaacacaggaggctttgaag
tatctttctaaattgaacagtaaattgaaagatgaactcaagaagagaaagcttctcatt
gaagtagtcattaaaagctataatttgtcaaaagggcctgaatttagtctgaccatcaag
aagggggagacggatttaactcctgaaatgattgcttccggttcttggaaggaaacagat
ttcaagccttacaactttaatgcactgggcattcaacctacaactgggaatcttcatccc
ttaatgaaagtacgggccgagtatcgtcaaatatttttagaaatgggatttaaggaaatg
cccaccaataactttattgaaagctctttctggaactttgatgccttatttcaaccacag
caacatcctgctcgagatgcccatgatacttttttcatttcagatccggctgaaagctcc
gactttccaaaggaatatctggaaaaggttaaaaaagttcatagtgaaggaggctttggt
tcaaaaggctatggctatgattggtcaattcatgaggcgaagaaaaatcttttacgaaca
catactacggctgtgtctgctagaatgctgtatcagctcatgcatgactctaaggatgaa
tttaagcctcaaaagtacttttccatagatcgagtatttcgtaacgaaacgctggacgct
actcatttagccgaatttcatcaaattgaaggcgtgattgctgatcgtggtcttactctt
ggggatctcatcggtattctgcacgaattttttaaaaagcttggaattgaaaagttgagg
ttcaaacctgcttataatccatataccgaaccttctatggaaatattttcataccatgat
gggcttaaaatatgggtggagattggtaattcgggtgttttccgtcctgaaatgttactt
cccatgggattaccagaggatgtcacagttattgcgtggggtttatcgttagaacggccg
actatgatcaaatatggtatcgacaatattagggatttatgtggtcacaaaattaatttg
aaaatggtggcaaagaatcctatctgtcgtctagacaaggattcccgtcgtccattagct
aatcttttacgagttgtggatcgacgttggacaacaattgaaagtgtaatcaatcagata
acaaaaaaatatggtatctcgttggattcagttcctgttactattgggaatacaaatcct
tcaagttttgtagtgtttgccgatcccaaatatcctcctttttctattgttccaattatc
aattctttgaaagatcaatttttcattagaatcagtcttcatgttcattctgatacaccg
actcagattatttccaatattcatagggatttttttgccctttttgaaaataaagaagat
aatacattaaataggccttcgatctcactcaaaatggtttggaagccaattggaatggat
tcaactctaatattaaacccacttagctcatctccaattaaaggagaaattaatttgatt
agatatttcatccgactcatgcccaatacacaaagtcatctcttttattataatgaaaaa
gttacagatttttatttggattatcttcatatgaatgttggtcggagtgtttcattatca
tctaagagtatgaatctaagttgtgtaaatgatttccttaccaatatctttatttggtct
ttggcatgtcaaaaaagacttaaattggacgaagctacaaagaagaatgtatctaaaaat
attaaaagggatgaatttatcatgcaagtcatgcatcattacaaattagaaaatattgta
tcatga
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