KEGG   Lepeophtheirus salmonis (salmon louse): 121119114
Entry
121119114         CDS       T08214                                 
Symbol
Rrp4
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
lsm  Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lsm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    121119114 (Rrp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsm03019]
    121119114 (Rrp4)
Messenger RNA biogenesis [BR:lsm03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     121119114 (Rrp4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     121119114 (Rrp4)
SSDB
Motif
Pfam: RRP4_S1 KH_6 ECR1_N ECR1_N_2
Other DBs
NCBI-GeneID: 121119114
NCBI-ProteinID: XP_040569684
LinkDB
Position
5:complement(28537389..28538700)
AA seq 309 aa
MDISLANEWEKPPEDVDEATTFVTPGDIITRESGYMRGHGTYASDEGNEEKECLIASVGG
VVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKVEVNSRLDAILHLSSVNLPGG
ELRRRSSEDELSMRTYLREGDLISAEVQTLYKDGSMSIHTRSLKYGKLEGGTVIKVSPSL
IKRQKTHFHTFPGGVSMILGLNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLG
LIESNPRLAIARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKT
QLRLESDNH
NT seq 930 nt   +upstreamnt  +downstreamnt
atggatattagtttagccaatgaatgggagaaacctccagaagatgtggatgaagcgact
accttcgtgactcctggagatattataaccagagaatcgggttacatgagaggacatgga
acgtacgcatcagatgaaggaaacgaggagaaggaatgcttgattgcatctgttggagga
gttgtcaaacgagtcaataaattaatacgcgtacttccactgagaagtacctatcaaggt
gaaatcggagatgttctcgtgggtagaatcgttgaggttcaacaaaaaagatggaaagtg
gaggtaaattcccgtcttgatgctattcttcacctttcatctgtaaatctccctgggggt
gagctacgtcgaagatcctctgaggatgaattatccatgcggacatatttgagggaaggg
gatctcatctctgcagaagtacaaaccctttataaggatggttcaatgtcaattcacacg
cgatccctcaaatatgggaaattggaaggtggaacagttatcaaagtctccccttcacta
ataaagcgacaaaagacccatttccacacgttccctggaggtgttagcatgatacttggt
ctaaacggattcatatggctgagcatcaaatcaatgatctcaatttctgaagaagatgat
gattacgaaaaacaagaatatgaaaatggcagtaattcttttgatgactcagatttggga
ctcatagaatcaaaccctcgtttagccattgctcgacttagaaacgtcgttctcgcactt
gctgcaaatggtgttcagctttgggatacttctattatatacggattcaaggcttcagag
aactacgacccaaaaagtttgcttaaaagagatgttatgtatgacgtggctaggaaaaca
caattgagactggagtctgacaatcattaa

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