Lepeophtheirus salmonis (salmon louse): 121119197
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Entry
121119197 CDS
T08214
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121119197
Enzymes [BR:
lsm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121119197
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121119197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
PA
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf_RING_Vps8
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
121119197
NCBI-ProteinID:
XP_040569750
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All DBs
Position
6:12084675..12087312
Genome browser
AA seq
416 aa
AA seq
DB search
MRKYCVSLLLLVMGWMNPTRSEVVIRYSTPKGHVTMRMESAEASFGLSIPLEGLMGRVRK
GQPLDGCTAIEEAPNRQEEDPLWFVILVRSSNCTFSEKVKAATKGNYSGAIIYNNNSDKV
LHMGGTGSYLTPSVFIGLTDGEVILHKYLYYQSANASVTLYPDDPFDLNVYLLPFAIVIG
ICFLLMLGIVIFKCVQDHRRNRRHRLPKSALKNLPIIRYNEESSPYDTCCICLDDYINND
KLRILPCDHAYHKNCIDPWLVKNRRICPQCRKKVFCQGQEDTDEEETTTERDSLLSNVRS
ITINGGTFHAGGTYAAALAEQVSHNSRRNFRTRFNLFSRYRRLEDNYLDNESLGQTSSNE
SSPEYQTPPEYQRPPTETTDVMHVAIVHSQDSSSSSSESENDGISRSRTTESEIVT
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatactgtgtgagtcttttgttgctagtgatgggttggatgaaccccacaaga
tccgaggtagtcatccgatattccactccaaaaggacatgtaacgatgagaatggaatct
gcagaggcctcttttggactctcaattcctctcgaaggtcttatgggtcgtgtacgaaag
ggtcaacctttggatggttgtacagctatagaggaagctccaaaccgtcaagaagaagat
cctttgtggtttgtcatcctcgtgcggagttcaaattgtacatttagcgaaaaagtgaaa
gctgctactaagggaaactactcaggagccattatatataacaacaacagtgataaagtc
cttcatatgggaggtacaggctcttatttaacaccttccgtctttattgggctcactgat
ggcgaagtgattctgcataaatatttatactatcaatcagcgaatgcgagtgtcactctt
taccccgatgaccctttcgatttgaatgtgtatttattaccatttgctattgtaattgga
atatgctttttattgatgttaggaattgttatattcaagtgcgttcaagatcatcgccga
aatagacgacatcgattaccaaaaagtgctctcaaaaatcttcctattattagatataat
gaagaaagttctccatacgatacttgttgtatatgtctggacgattatatcaataatgat
aaactacgtattttgccctgtgatcatgcatatcataaaaactgtattgatccctggtta
gttaaaaatagacggatatgcccccaatgtagaaagaaagttttctgtcaaggacaggaa
gacacagatgaggaagaaactactacggagagagattcattgctaagtaatgtaagatcc
attactattaacggaggtacttttcatgctggaggaacatatgcggctgctctagcagaa
caagtctctcataactctcggcgaaactttagaacgagattcaatttgttttcaagatat
cggcgcttagaagataattatttagacaacgaatctttgggacagacctcttcaaatgag
tcatctcctgaatatcaaacacctcctgaatatcaaagacctccaactgagacaacagat
gtcatgcatgttgcaatagttcattcacaggattcttcatcatcttcatctgagagtgaa
aatgacggaatcagtagaagtagaaccactgaaagtgaaatagttacataa
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