Lepeophtheirus salmonis (salmon louse): 121119264
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Entry
121119264 CDS
T08214
Symbol
l(2)dtl
Name
(RefSeq) protein lethal(2)denticleless
KO
K11790
denticleless
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121119264 (l(2)dtl)
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121119264 (l(2)dtl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
PEP5_VPS11_N
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD_LRWD1
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_RIG_1st
WDR90_beta-prop_4th
VPS11_N
Beta-prop_Vps41
WD40_RFWD3
WDR54
Motif
Other DBs
NCBI-GeneID:
121119264
NCBI-ProteinID:
XP_040569823
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Position
6:complement(29735957..29738046)
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AA seq
598 aa
AA seq
DB search
MYHGNKKHLLDHLNGFSHQLDAIRDNLEVLTLRSYRQNSICLEAEEDPSEPTYTLRFYPR
EGEKESLLAIGKEEGQVRLEDVNTNKTLFNIRAHTNAIFDLDWSPSGDVICTGSGDETLG
LWDSSNFKSIQFLRGGHERTVKTLQFAPGSDKVIASGSRDNSIILWDVRSPVPMLNRIKN
AHVSKAHRSCSVTSIKFLQKDNCLVSVGEMDGLIKVWDLRKNYSLYKRDPIPSYSLPHPG
GSSSLGFTCLAVDSSNTVFVSCMDDKIYRYNLASNSDLPVNTYTGYENNSFFVRISLSPD
EEYLASGSSDSFSYIWRVNSLAYGQETYPICKLQGHLAEVTCVEWCKGNWTLVTCSDDVQ
HCIWRPDRRDIENPSDVFGETVPYKQPIPLTPPSRYTSLIPNTTQTPPIHFTPSSLNKRN
RSDRTPGNSTSKKRKLTPSILNFFPKSGSKRSLSDNESCASTPPCKKSNIENVSPQKESL
KTLVTIQEREPLMHKSRNKNVKKLFDEVTEQSSTSSSPFKFDRYPCSPTKMLILSNKDLE
SPKRLHISPMKPFSPTLNLPNSVIDRQTPTSSSKKRDRPINWLTSLTNKKKSKAAKKL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtatcatggaaacaagaaacaccttttggatcatttaaatggatttagtcatcaactt
gatgcgattcgtgataatttagaggtgttgactctgcgtagctatcgacagaattcaatt
tgccttgaggcggaagaggatccctctgagcccacgtacactcttcgtttctatccgcgt
gaaggagagaaagagagcctccttgccatagggaaagaggaaggacaagtccggctagag
gatgttaacaccaacaagactctcttcaacattcgtgctcatactaatgccatttttgac
ctggattggtctcccagcggagatgtgatatgtacgggatcgggggacgagactcttggt
ctatgggactcttctaatttcaaatctattcagtttcttcggggaggtcatgaacgcact
gtgaaaactcttcagtttgctccagggtccgataaagtgattgcatctggatccagagat
aattctatcattctttgggatgttcgatctcctgtgcccatgctcaatcgtattaaaaat
gctcatgtatccaaagcacatcgctcttgctcggttacatccattaaattcctacagaaa
gacaattgtcttgtctcagttggagaaatggatggtctcatcaaagtttgggatctacga
aagaattactccttgtataaacgggatcctattccaagctatagtctcccacatccagga
ggatcctcttctctaggattcacttgtttagccgttgactcctccaatacggtttttgtt
tcttgtatggatgacaagatttatcgatacaatctagctagcaacagtgatcttcccgta
aatacctatacaggatatgaaaacaatagtttctttgttcgtatttctctaagtccagat
gaagaatatcttgcatcaggctctagtgattcattttcatacatttggcgtgtcaattca
ctcgcatatggacaagaaacgtatccaatatgcaagcttcaaggacatttagcagaagtt
acatgtgttgaatggtgtaaaggtaattggactctagttacctgcagtgatgatgtccag
cactgtatatggagacctgatcgaagggatattgagaatccaagtgacgtctttggtgaa
acagttccttataagcaacccattcctttgaccccaccaagtagatatacatctttaatt
cctaacacgactcaaacaccgccaattcattttactccttcttctttaaacaaaagaaat
agatccgatagaacgccgggaaattctacttccaaaaaaaggaagttgactccatccatc
ttgaactttttccctaaaagtggtagtaaacgtagcttaagcgataatgagagctgtgct
tcgactcctccgtgtaaaaaaagtaacattgaaaatgtttctccgcaaaaggaatccctt
aagacacttgtgactatacaggaacgtgagcctcttatgcacaaatctagaaataagaat
gttaagaagttatttgacgaagtcactgaacaaagcagtacatcctcatcaccttttaag
tttgacaggtatccatgctctccgaccaaaatgctcatattatcaaacaaagatctagaa
tctccgaaaagacttcatatatctccaatgaagccattttcgcccacgttaaaccttccc
aactctgtaatagatcgtcaaactcctacatcttcctctaaaaagcgggacagacctatt
aattggctaacttcacttaccaataaaaagaagagtaaagcagctaagaaattgtaa
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