Lepeophtheirus salmonis (salmon louse): 121119344
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Entry
121119344 CDS
T08214
Name
(RefSeq) integrin beta-3 isoform X1
KO
K05719
integrin beta 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04145
Phagosome
lsm04512
ECM-receptor interaction
lsm04820
Cytoskeleton in muscle cells
lsm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
121119344
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121119344
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121119344
09142 Cell motility
04820 Cytoskeleton in muscle cells
121119344
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121119344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121119344
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsm04147
]
121119344
04515 Cell adhesion molecules [BR:
lsm04515
]
121119344
04090 CD molecules [BR:
lsm04090
]
121119344
Membrane trafficking [BR:
lsm04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
121119344
Exosome [BR:
lsm04147
]
Exosomal proteins
Proteins found in most exosomes
121119344
Cell adhesion molecules [BR:
lsm04515
]
Integrins
Integrin beta subunits
121119344
CD molecules [BR:
lsm04090
]
Proteins
121119344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
Integrin_b_cyt
EGF_Teneurin
I-EGF_1
EGF_2
Transgly_assoc
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
121119344
NCBI-ProteinID:
XP_040569922
LinkDB
All DBs
Position
6:complement(26063724..26129766)
Genome browser
AA seq
821 aa
AA seq
DB search
MMLFSSYKSTLHLLLLLFLLLHSLGSVTPKRKNPCIFEEDCDSCLLRPRCAWCKDPNWKG
SRCNLIANQKDCSYIENPEGSVEILEDRPLSGSSHQNYVQIHPQRVRIRTRVGKEVKFDF
QVSQAKEYPVDLYYLMDLSNSMSDDREMLAKLADKIASAIQSITKDFHIGFGSFVDKEVY
PFISLIPEENCQTPDCPGPYSFQHQMKLSPDPFLFREKVRRAPISGNIDQPEGGLDALVQ
VMVCDDQIGWRAKSRRVVIFTTDTNFHIAMDGKLGGIVTPNDGICHLNNSGFYTHSKILD
YPSIGHIANLAKEHSVNIIWAVTEDQYHLYQTLTEHIIGSRIGTLSKDSSNIVELIREAY
ESITTSFKIHETSSDNIKTKFRNRCELGNGREECLGMELGTSVKFRMSVKPVGCVPETFD
VSPVGLDDRLIVEVEPLCECSCAAAAAATYSPVMSCGSSDLCSGRGRLICGECSCCPGYF
GLRCECEGTLDMKSMSCRPFNTSILVPPCTGRGDCVCGTCECKVSRPGVVFSGSYCEVVC
DNTACETDNNGRLCSGHGECTCGECFCDDNWTEENCGCYKGDPNKCLHAPGEEICSGHGV
CPCDKCICTTDGHYGEYCQYCDTCQSTCSTLRSCVECMAFFTESHERDCSPVCQSDIDAE
KALYAVEYEEKFIEDILNSYENCTFTFKDCEYSFSYTEKKESIRAPPSKKDQPFQLHRSY
FHVLFHFTDPKYREKTDTPKLKCPPEPNIWGLILGIIGAIVLIGIFTLLLWKTFTTISDR
REYAKFEADRAQVKLPAHSNPIFKQATTTVQNPLFNPSKVS
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgatgctcttttcttcctataaatccactcttcatctcctacttcttctctttcttctt
cttcattccctgggaagtgtgacgccaaaacgtaaaaacccttgcatctttgaagaagac
tgcgactcctgtctcctacgcccacgatgtgcctggtgtaaagatcccaattggaaaggg
agtcgctgcaatcttatagctaatcaaaaagactgctcttacatcgaaaatcctgaagga
agtgttgaaatcctagaggatcgtcccctcagcggatcctctcatcagaattatgttcaa
atacacccacagagagttcgtatacggacacgagtggggaaggaagtcaagtttgatttc
caagtctcacaggccaaagaataccccgtggatctatactatttaatggatctttccaac
tccatgtcggatgatagggaaatgctggctaaattagcggataaaatagcctctgccatc
cagtccataacaaaagactttcatattggatttggaagctttgtggataaggaggtctat
cccttcatcagcttaattcccgaggaaaattgtcaaactccagattgtcctggaccttat
agcttccaacatcaaatgaagttgagcccggatccctttctattccgagaaaaagtgcga
agagcgcctatttctgggaacattgatcaaccagaaggaggattggatgcattagttcag
gtcatggtttgtgatgatcaaattggttggagagctaaatctcgaagagttgttattttt
acaacagataccaattttcatattgcaatggatggaaaactgggaggtattgtgactcca
aatgacggtatctgtcacttgaacaactctggtttttacacccattccaaaattttggat
tatcctagcatcggacacattgccaatttagccaaagagcattctgtgaacattatatgg
gctgtaactgaggatcagtatcacttgtaccaaactctaactgaacatatcattggctca
agaattggtaccctctctaaagattcatccaacatagtggagctaattcgagaggcctat
gagtccatcactacttcttttaaaatacacgaaacctcatctgataacattaaaaccaag
tttcgaaatcgatgtgaacttggaaacggaagagaagaatgtttgggaatggaattgggt
acatctgtcaagtttcgaatgtctgtgaagcccgtggggtgtgttccagagacatttgat
gtatctcctgtcggattagatgatcggctgatagttgaagttgagccactttgtgagtgt
tcatgtgctgcagctgcagctgctacttattctcctgttatgagctgtgggtcatctgat
ctctgtagcggacgaggtcgtttaatttgtggggaatgttcctgctgcccaggctatttt
ggattacgttgtgaatgtgaaggaacgttagatatgaaaagtatgagttgccggcccttt
aatacatctattctagtccctccatgcactggaagaggtgattgtgtttgtggtacatgc
gaatgtaaagtgtctagacctggagttgtctttagtggaagttattgtgaagtcgtttgc
gataatactgcttgcgaaaccgacaataatgggcgactctgttctggccatggtgaatgc
acctgtggtgaatgtttttgcgatgataattggaccgaggaaaattgtggttgttataaa
ggggatcctaataaatgtttgcatgccccaggagaagagatctgctctggacatggagtg
tgcccgtgtgataaatgcatttgtacaacagatggtcattacggggaatactgccaatat
tgtgatacttgtcaaagtacatgttccacgttaagaagctgtgtcgaatgtatggctttt
ttcaccgagagccacgagagagattgttcccccgtttgtcaaagtgatatcgatgccgag
aaggcactctatgctgttgagtacgaggaaaaatttatagaagacattttgaactcctat
gaaaattgtacatttacattcaaggactgtgaatattcattttcatacacggagaaaaag
gagagcattcgtgctccaccttctaaaaaagatcagccttttcagctacatcgttcctat
ttccatgtgctatttcattttacagatcccaaataccgggaaaaaacagatactcctaag
ctaaagtgtccaccagagccgaatatttggggactcatacttgggattattggagctatt
gttctcataggtatcttcacattacttttatggaagacttttactacaattagtgataga
agagaatatgcaaaatttgaagctgatagagcacaagtcaagttacctgctcattcaaat
cctatttttaagcaagctaccacaacagtacagaatccattattcaatccttcaaaagtt
agctga
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