Lepeophtheirus salmonis (salmon louse): 121119347
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Entry
121119347 CDS
T08214
Symbol
mahj
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lsm01001
]
121119347 (mahj)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121119347 (mahj)
Enzymes [BR:
lsm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121119347 (mahj)
Protein kinases [BR:
lsm01001
]
Serine/threonine kinases: Other
Other
121119347 (mahj)
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121119347 (mahj)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mahjong_helical
DCAF1_helical
DCAF1_4th
DCAF1_N
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_WDR75_1st
VID27
WD40
ANAPC4_WD40
WDR55
LisH_PAC1
LisH_2
PEP5_VPS11_N
WD40_like
Beta-prop_WDR90_POC16_2nd
LisH_TPL
WD40_WDHD1_1st
IR75A_N
Dimer_MINDY4_N
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
LisH
Motif
Other DBs
NCBI-GeneID:
121119347
NCBI-ProteinID:
XP_040569925
LinkDB
All DBs
Position
6:3400952..3406794
Genome browser
AA seq
1455 aa
AA seq
DB search
MLSLSGLANALSGNTSTSLTEFQNIIKTWEESRTSTSFDPTDVLTKLSELLEKEHEHYAA
SDPDPFEDRHPHRVDPECQLGQLLKHFFKKESLVQDLFNNYLKDNYWIQLGQTRRDSFLV
NVAAARLVLGILPALQTSVIMETSGLVGRLYSWVENAKEPLQSYATGLLAVASELSDVAT
DPENREKNGRIIPIILQRLRKYQSEMMEEVKQGQDISSNTTTNPKIDSPNSNKFKRPFSI
FGKKSPVQVRRSSNEALDSSSALDLKKPPDDLSNPMRHNNFSKDNSSLNQGVLFENWSNS
SWAEMEAQIICHFRIHPLTLVGKQVFILRLLSPLAEYQEFLSFTVDSGVLELISNYLKVR
ETRNTRLAFEALRFQAGLFCHKRMVMEWVTTGGIPKLIAIPRPSIASTAVSQVLYYIGCD
DDSMEKVCLLPHNLLEDLVKYVLWLIECSHDSGRQFAIMFSYLSFSFRVFLDIFDQKDGI
RMIYNTVNTLPILNHEDNRILLSDDQEYLQRQSVRQVMVAYKKYTDAQLALKAEQLKRFH
TREFVESRVSVPNYKPNRLSPEQSQECIETLVNFMPFKAKWPPMDKFIQLGGITMCLKVI
AIAYDWSCTGRSETVRSALDCLCIAAILPKVQLQLCERIELPDDSKTVGFNILLSAAEGE
IIQDSSEVQKASLSVLINCLCSQKGYSSNSSSTTNYCSSSFLLKKKLANSKSAEDLINKV
WDCVRTNNGIMALLQLLHTKTPITDADAIRALACKALTGLGRSPAAKQIMSKLPIFTNGE
LQQLVREPVLLDKRGEHVKFQQYAHDLLELVSGPAGPRHLTECNDFSIEMLHRASVVAQT
KIRFPKKQLLQLIQEYLASQGLNESVSVLQREANLALLTTKNLHHNRSTPTGNPITPSNS
TPSFSSRVTNSASRLISSPSRSSTSLLNNSSIQNTPSTPIPIRLNRASRKLDIGSPSPSM
TVLTNRRSDFDNAGISNSHSGVEASKNSLVSIISDYLSSQHSLCKNPMSTCPEFDLFLPH
KCPDPRPRMSAPYNFATRYTLRSIFPPFGGPDGRKLDLKLMYGRFRPVKTFRPSIESENR
QDNNFSSVAITPDDQFILVGTNKGEVRLFNSYTGAEEVTFQCHTSTVHHIQPSRDGKFVL
TSSSWRAPYSNMWSMGEFFESKMIFEHEDYIEFSKVSQDKIIGTANEVAKIYDIERNQVI
QTLSPQISNNYSKNRATFDPTDELVLNDGVLYDLRMSKEIRKLDKLNQNLSGVFHPNGLE
IVSNTEVWDIRNFHLLKTVPQLDQCHITFTNSGDIIYARTMEQDTEDGDKYESSFKTLDA
SDYSSIATIETRRSILDLCTSSNDLQLAVVENLPLLTVEESVVRLYDVGRLRADQEDYDE
EEDDDKDDEDGQGDDNDSDDSNGFTDLLGSSSDEDDGMFRGENFSDVDYEEEEEEEEEDW
DYDGNLQDGDDTEEF
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgttatccctgagcggattggcgaacgctctcagtggtaacacttccacttctctcacg
gaatttcaaaacattatcaaaacgtgggaagagtcacgaacgtccacctcattcgatccc
actgatgtcctcaccaaactatccgaactcttggagaaggaacatgaacactacgccgcc
tcagatccggacccctttgaggaccgtcacccccaccgcgttgaccccgaatgtcagctt
gggcaactcctcaaacatttctttaaaaaagaatctcttgtgcaagatctatttaataat
tatctgaaagacaattattggatccaattgggacaaacgagacgggactcctttctagtg
aacgttgctgcggcgcgtcttgttttagggattcttcctgcacttcaaaccagtgttatt
atggaaaccagtggtttagttggaagactctattcctgggttgaaaatgcaaaagaacct
ttacaaagttatgcaactgggcttttagcagttgcatctgaactctctgacgttgccaca
gatccggaaaatagagaaaaaaatggtcgcataatacccattattcttcaaagactaagg
aaatatcagtctgaaatgatggaagaagtgaagcaaggtcaggatatttcatcaaatact
acaacaaatccgaaaatagactcaccgaattctaacaaatttaaaagacctttttcaatt
tttggtaaaaagagtcctgttcaagttcgaagatcatcaaacgaagcattagacagctcc
tcggctttagatttaaagaaacctccagatgatctcagtaatccaatgcggcataataat
ttctctaaggataactcctctctaaatcaaggggtattatttgaaaattggtctaattca
tcttgggctgagatggaggcccaaataatttgtcattttcgaattcatcctttaacatta
gtgggaaaacaagttttcattttgcgtctcctgtctccattggctgaatatcaagaattt
ttaagtttcacagtggatagtggtgtcttagaattaatttcaaattatctcaaagtaaga
gaaactcgtaatacgcgtttggcatttgaggcccttcgttttcaagcgggtttattctgt
cataaaagaatggtcatggaatgggttacaacaggtggtattccaaagcttattgcaatc
cctaggccatctattgcatctacagctgtcagtcaagttttatattatattggttgtgat
gatgattcgatggaaaaagtgtgtttattgcctcataatctcctggaggaccttgttaaa
tatgtactctggctcattgaatgttctcatgactcgggtcgacagtttgcaattatgttt
tcatatctttcattttcctttcgtgttttccttgatatttttgaccaaaaagatggtata
agaatgatttacaataccgtcaacacacttcccattcttaatcacgaagacaatcgaatt
ttgttatctgatgatcaagaatatttacaaagacagagtgtacgacaagttatggttgct
tacaaaaaatacactgatgctcaacttgcattgaaagcagaacaacttaagagattccat
actagagagtttgtagagtctcgtgtctctgtgccaaattataagcctaatcgtcttagt
cctgaacaaagtcaagagtgcattgaaactctagttaatttcatgccgttcaaagctaaa
tggcctcctatggacaaatttattcaacttggtggtattactatgtgtttaaaagtaata
gcaattgcatatgactggtcctgtactggtcgatccgaaactgtgagatctgcattggat
tgtttatgcattgcagccattcttccaaaagtgcagttacaactttgtgaaagaattgaa
ctccctgatgactcaaaaactgtaggattcaatattcttttaagtgcagctgagggtgaa
attattcaagattcatcagaggtgcagaaagcatctttgagtgtattgataaattgtctg
tgttcacaaaagggatattcatcaaattcatcatcgactactaattattgttcatcatct
ttcttgttgaagaaaaaacttgctaattcaaagagtgccgaagatttgattaacaaagtg
tgggactgtgttcgtactaataatggtattatggctctgttgcaattgctccataccaaa
actccaataacggatgctgacgcgattcgagcccttgcatgcaaagcacttacaggtcta
ggaagatctcctgctgcaaaacaaattatgtccaaacttcctatttttaccaatggagaa
ctacaacaactagttcgagagccagttcttttagataaaagaggtgaacacgtaaaattt
caacaatatgcccatgatcttctcgaacttgtttctggccctgcaggccctagacatctg
acggagtgtaatgacttctctattgagatgcttcatagggcatctgtcgttgctcaaaca
aagattcgtttccccaaaaaacaactactccaattaattcaagaatatttagctagtcaa
ggacttaatgaatcagtgtctgtgttacaaagagaagcaaatcttgcacttttaacaact
aaaaatttgcatcataaccgttcaactccaactggtaaccccattactccttccaattca
actccatctttttcctcacgagtgactaattcagcttctcgtcttatttcttctccatca
aggagttccacatctcttcttaataatagttcaatacaaaatacgccttccacgcctata
ccaattcggcttaatcgcgcatcccgaaagcttgatattggttctccatctccgtccatg
acagtcctcacaaatcgccggtcagactttgataatgccggtatatctaattcacattct
ggagtcgaagcttcaaaaaattcacttgtgtcaataatatctgattacttatcttcacaa
cattccttgtgtaaaaatccgatgtcaacatgcccagaatttgatctctttcttcctcat
aagtgccctgatccaagacctagaatgtctgctccttataactttgctactcgatatact
ttaaggtcaatttttcctccttttgggggtcctgatgggagaaaattggatttaaagtta
atgtatggacgatttcgaccagtcaaaacctttcgtccttcaattgaatctgaaaataga
caggacaataatttttcctcagtagccattacaccagatgatcaatttattcttgtggga
acaaataaaggagaagtcagactttttaattcttacactggtgcggaagaagttactttt
caatgtcatactagtactgttcaccatattcaaccttcgagagatggtaaatttgtttta
acgtcatcgtcttggcgagcaccttattcaaatatgtggtccatgggtgaattctttgaa
tccaagatgatatttgaacatgaagattatattgaattttccaaagtgtcacaggataaa
attataggaacggctaacgaagttgcaaaaatttatgatattgaacgaaaccaggttata
caaactttatccccccaaatatcaaataactattcaaaaaatcgtgcaacttttgatcct
acggacgaattggttctgaatgatggtgttctctacgatttgcgaatgagtaaggagatt
agaaaacttgacaagttgaatcaaaatttgtctggtgtgttccatccaaacggtttggaa
attgtgagcaatacggaagtgtgggacattcgcaactttcacttgcttaaaactgtgcct
caattagatcaatgccatataactttcaccaactccggagacattatttacgcaagaaca
atggagcaagacacggaggacggtgacaaatatgaatcatcatttaaaactctggatgct
tccgactattctagtattgcaacaatcgaaacacgaagatctattttagatctgtgtaca
tcatctaatgatcttcaacttgcggttgtagaaaatttaccgttactcacagtcgaggag
tctgttgttcggctgtatgatgtgggtagactcagggctgatcaagaagattatgacgaa
gaagaagatgatgataaggatgatgaggacggtcaaggggatgacaatgattcggacgac
tcaaatggttttacggacttgttaggatcttcgtcagatgaagatgatggaatgttccga
ggcgaaaatttttcggatgtcgattatgaagaggaggaggaagaagaagaggaagattgg
gattacgatggaaatttacaagatggcgatgacactgaagaattttaa
DBGET
integrated database retrieval system
