Lepeophtheirus salmonis (salmon louse): 121119529
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Entry
121119529 CDS
T08214
Name
(RefSeq) WD repeat-containing protein 18
KO
K14829
pre-rRNA-processing protein IPI3
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsm03009
]
121119529
Ribosome biogenesis [BR:
lsm03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
121119529
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_NUP159_NUP214
Beta-prop_RSE1_2nd
Beta-prop_IP5PC_F
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
121119529
NCBI-ProteinID:
XP_040570147
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Position
6:complement(8919587..8921205)
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AA seq
415 aa
AA seq
DB search
MNVRRNEVLVTGDDYGAQWNLAVWDPSNGTSLVTYKGGTSIPGSFNILGSSYVVSVLKNK
AVLNVWRLDRHEQLPQKITTPGKLKALSANPNDGRFLVGSIAESIYLWQTNTGRLLNILV
RHYQEVNRLAWTDDGSFILSAGKDGALIAWSLSEVMSPSESTKEPYHIWNDSALEITDLV
VGKGGPRARIFTCSYDQHVRVYDLPSASLLLEVTFSKPLTSIAVDSSEVWIYLGSSKGDI
HTFSLRDTPCKSDSIKTMISPSQKNSFLGHSLPISCLSISIDGSTLASGSEDKDVRIWDV
KSRQTLRIISMKGLVTIATFLSPPPRGMLDHEDFLQDLNLCQLEKNIGSNDNYTLKVSTP
YGFEDSFLEDDTLSPIPYAAKSESSNINNNDKEVERLKKINMSLYQSAVELILNK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcgacgaaacgaagttttagtgacgggagatgattatggagctcaatggaat
cttgctgtttgggatccaagcaatgggacttcgcttgtaacttacaaaggaggtacttcc
attcccggatcatttaacatccttggatcttcttacgtcgtgtctgttctcaagaacaaa
gctgtcttgaacgtatggagattggatcgacatgaacaactccctcaaaaaataaccaca
cctgggaagctcaaggccttaagtgcgaatccgaatgatggtcgatttcttgttggatcc
attgcagagtctatctatttatggcagacaaatacggggagacttctcaatatattagtt
cgacactatcaggaggtaaatcgactcgcctggacagatgatggatcttttattctatca
gccggaaaagacggagctctcatcgcatggagtctatctgaggttatgtctccttctgaa
tcaacaaaagaaccctatcacatttggaatgatagtgcattagaaattacagatcttgtt
gtgggtaaaggtggcccaagagcccgtatattcacttgctcctacgatcaacatgtgaga
gtgtatgaccttccatctgcatcacttctcttagaagttactttttcaaagccactcact
tcaattgctgtcgacagctccgaagtttggatctatctaggctcgtcaaaaggagatata
catacttttagcctaagagatactccttgtaaaagtgattccatcaaaacaatgatttct
ccatcccaaaaaaactcattccttggacactcactacccatatcttgtttatctatttct
atagatggtagtacacttgcttcgggatcagaagataaagatgttcgaatttgggatgtg
aaaagtagacaaaccctaagaataatttccatgaaaggccttgtgactatagcgacgttt
ttatctcctcctccacggggtatgctggatcatgaagactttctgcaagatttgaatcta
tgtcaactggaaaagaatatcggttcaaatgacaactatacacttaaagtgtctactcct
tacggtttcgaggactccttccttgaagatgatactctaagccctattccatacgcagcc
aaatccgagtcgtccaatattaataataatgacaaagaagtagagcgccttaagaaaatt
aatatgtccctgtatcaatcagctgtggagttgatattaaataaataa
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