Lepeophtheirus salmonis (salmon louse): 121119770
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Entry
121119770 CDS
T08214
Symbol
Prp3
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121119770 (Prp3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsm03041
]
121119770 (Prp3)
Spliceosome [BR:
lsm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
121119770 (Prp3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
VPS28
Motif
Other DBs
NCBI-GeneID:
121119770
NCBI-ProteinID:
XP_040570492
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Position
6:complement(55952587..55955122)
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AA seq
615 aa
AA seq
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MSSILNGEHIKDLEPEIRNVIKKYLGFSEPDLLSASLAAIMQGGGPDRIIIKLATLLDYK
KAEKLASRIWDVVDDFCISRELTACRKRALLEPESGLSLEEEKDVENKEEPSTKKPSLMT
PEQIRSMMSNTMMELKKRKQEMNSGSNGSKIPPPGVAAIPPAPFIDQKAKTIAALQAQIA
SKMEKMKEAIKPQGLILNDKGRMVDTSGQEIQMMQHTPTLKANLRVKKRDEMKDSKDGSG
GQQKIEANQDPSIKFFDPRLSKKTVTRNKKVFSFHEPGKFQIEGNRMRMKAQLERLQAGI
STTARKTGITSAAQLAKLVPKGDGKDRVPDVEWWDQLIMKENIYQNCELRDEAITNLIEH
PIQLQPLESSKVPQVAVFLTKKERKKLRRQNRREAWKEKLDKIRLGLIEPDQAKVKLSNL
MRVLGNEAVQDPTKVEAHVREQMAKRLATHTQMNEDRKLTPEQRKEKMIRKLKEDTSGGV
SVAVYRIKSLGNQSKKFKVETNAKQLYMTGTIVLYEDVNVVVVEGGPKQQKKYRQLMLNR
IKWDEETYKDKDGVECVNNCVLVWEGEIKERHFPEMKFKVCPSEIFAREYFKKSGVEHYW
DQAYSEAVVEASDNI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaatattgaacggagagcatatcaaagatcttgagcccgagatccgtaatgtg
ataaagaagtacttgggtttcagtgagccggatctgctgtcagcctctctggcagccatc
atgcagggcggaggtccggatcgaatcattattaagctggccactttgttggactacaaa
aaagccgagaaattggcatcacggatttgggatgttgtggatgacttttgcatttcccga
gagttgacggcctgccggaaaagagccttgttggaaccggagtctggattgtccttggag
gaggagaaggatgtggagaacaaggaagagcccagcacgaaaaaaccctcactcatgact
cctgaacaaatccgctcaatgatgtccaataccatgatggagctcaaaaaacggaagcaa
gaaatgaactctggtagtaatggatccaagattcctcctcccggtgtagctgctatacct
ccagccccctttattgaccaaaaggccaagactattgctgcacttcaagctcagattgcc
agtaaaatggagaaaatgaaggaggccattaaacctcaaggcttaattctgaacgataaa
ggaagaatggtcgatacttcgggtcaagaaattcaaatgatgcagcacacacctacatta
aaagcaaatttaagagttaaaaaaagggacgaaatgaaggactccaaggatggatctggt
gggcagcaaaagattgaagctaaccaagatccctccatcaaatttttcgatcctagatta
tcgaaaaaaactgttactcgaaataaaaaagtgtttagttttcatgaacctggtaaattt
caaattgaaggaaatcgcatgcgtatgaaagctcagttggaacgtttacaggcgggtatt
tcaacaacagctcgtaaaactggtattacatcagcagcacaacttgcaaaattagttcca
aaaggggacggaaaggatcgagttcctgatgttgaatggtgggatcaacttattatgaag
gaaaatatctaccaaaactgtgaactccgagatgaagccatcacaaatctcattgaacat
cccattcaacttcagcccttagaatcatctaaagtacctcaagttgctgttttcttgaca
aagaaagaacgtaaaaaattgcgtaggcagaatcgccgagaagcatggaaggaaaagcta
gataaaatccgattgggactcattgaaccggatcaggcaaaagtgaagctctcaaattta
atgcgagtattaggaaatgaggcagttcaagatccaactaaggttgaagcccatgtaagg
gagcaaatggctaaaagattagccacacatacgcaaatgaatgaggatagaaagttaact
cctgaacagagaaaagaaaaaatgattcgaaagctgaaagaagatacttcagggggtgta
tctgtggcagtgtatagaatcaaaagtcttgggaatcaatccaagaaattcaaagtcgaa
acaaatgcaaagcagttgtacatgacaggcactatagttctatatgaagatgttaacgtt
gttgtcgtggaaggtggtccaaagcaacagaaaaagtatagacagctcatgttaaaccga
ataaaatgggatgaagaaacgtataaggataaagatggcgtagagtgtgtaaacaattgt
gttctcgtctgggagggtgaaatcaaggagagacactttccagaaatgaagttcaaggtt
tgtccatctgagatctttgcacgggaatatttcaaaaagtctggtgttgaacactattgg
gatcaagcgtacagtgaagccgtggtagaggcatctgataacatttaa
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