Lepeophtheirus salmonis (salmon louse): 121119953
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Entry
121119953 CDS
T08214
Name
(RefSeq) tubulin alpha chain, testis-specific isoform X1
KO
K07374
tubulin alpha
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04145
Phagosome
lsm04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121119953
09142 Cell motility
04814 Motor proteins
121119953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121119953
03036 Chromosome and associated proteins [BR:
lsm03036
]
121119953
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsm04812
]
121119953
04147 Exosome [BR:
lsm04147
]
121119953
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121119953
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121119953
Cytoskeleton proteins [BR:
lsm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121119953
Exosome [BR:
lsm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121119953
Exosomal proteins of other body fluids (saliva and urine)
121119953
Exosomal proteins of colorectal cancer cells
121119953
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121119953
NCBI-ProteinID:
XP_040570736
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All DBs
Position
6:628962..632939
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISVHVGQAGSQMGNACWELYCLEHGIQPDGHMPSDKTVGSADDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEILDLVLD
RIRKLSDNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVATA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVSEVTNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGMDSLDPEDEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctccgtacatgttggccaagctggaagccaaatgggcaatgcatgc
tgggagctatactgcttagaacatggtattcagcctgatggacatatgccctctgataaa
acagtcggatctgcagatgattccttcaatacatttttctctgagactggcgcgggtaaa
catgtccctagggctgtttttgtggatttggaaccgactgtaattgatgaaatccgcact
ggaacttataggcagctctttcatcctgaacaattagtaacaggcaaggaggatgctgcc
aataactatgctcgtgggcactacacaattggtaaagaaattttggatttggttcttgat
agaattcggaaactctctgataactgcactggacttcaaggattcttagttttccattcc
tttggaggagggactggatcgggattcacttctttactgatggaacgcctctctgttgat
tatggaaagaagtccaagcttgagttctccatttatccagctcctcaagtagctacagct
gtagttgaaccatataactcaattttaaccactcatacaactctcgagcattccgattgt
gcatttatggttgacaatgaagccatttacgacatttgccgaaggaatcttgacattgaa
cgtcccacatacactaatcttaatcggctcattggacaaatagtatcgtccatcacggca
tctcttcgattcgatggagcattaaatgtggatctaacagagtttcaaactaatttagtg
ccttatccccgtattcactttccattggtgacctatgctccagttatttctgctgagaag
gcctatcatgaacaattgtctgtttccgaggtgacgaatgcatgctttgaacctgccaat
cagatggtaaaatgtgacccccgacatggcaagtatatggcttgttgcatgttgtatcgt
ggagatgttgttccaaaggatgtgaatgcggcaattgcaacaatcaaaacgaagagatcc
attcaatttgtggattggtgtcccacaggctttaaagttggaattaactatcaacctccc
actgtggtacccggaggggatttagccaaggttcaaagagctgtttgtatgctctctaat
acaactgcgattgcggaagcttgggctcgtcttgatcataagtttgatcttatgtatgcc
aaaagagcatttgttcattggtatgtgggagagggtatggaagaaggagaattttctgaa
gcaagagaggatttagctgctcttgagaaagattacgaagaagtaggaatggactccctc
gaccccgaggacgaggaaggagaggagtattaa
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