Lepeophtheirus salmonis (salmon louse): 121119953
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Entry
121119953 CDS
T08214
Name
(RefSeq) tubulin alpha chain, testis-specific isoform X1
KO
K07374
tubulin alpha
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04145
Phagosome
lsm04517
IgSF CAM signaling
lsm04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121119953
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121119953
09142 Cell motility
04814 Motor proteins
121119953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121119953
03036 Chromosome and associated proteins [BR:
lsm03036
]
121119953
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsm04812
]
121119953
04147 Exosome [BR:
lsm04147
]
121119953
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121119953
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121119953
Cytoskeleton proteins [BR:
lsm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121119953
Exosome [BR:
lsm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121119953
Exosomal proteins of other body fluids (saliva and urine)
121119953
Exosomal proteins of colorectal cancer cells
121119953
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121119953
NCBI-ProteinID:
XP_040570736
LinkDB
All DBs
Position
6:628962..632939
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISVHVGQAGSQMGNACWELYCLEHGIQPDGHMPSDKTVGSADDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEILDLVLD
RIRKLSDNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVATA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVSEVTNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGMDSLDPEDEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctccgtacatgttggccaagctggaagccaaatgggcaatgcatgc
tgggagctatactgcttagaacatggtattcagcctgatggacatatgccctctgataaa
acagtcggatctgcagatgattccttcaatacatttttctctgagactggcgcgggtaaa
catgtccctagggctgtttttgtggatttggaaccgactgtaattgatgaaatccgcact
ggaacttataggcagctctttcatcctgaacaattagtaacaggcaaggaggatgctgcc
aataactatgctcgtgggcactacacaattggtaaagaaattttggatttggttcttgat
agaattcggaaactctctgataactgcactggacttcaaggattcttagttttccattcc
tttggaggagggactggatcgggattcacttctttactgatggaacgcctctctgttgat
tatggaaagaagtccaagcttgagttctccatttatccagctcctcaagtagctacagct
gtagttgaaccatataactcaattttaaccactcatacaactctcgagcattccgattgt
gcatttatggttgacaatgaagccatttacgacatttgccgaaggaatcttgacattgaa
cgtcccacatacactaatcttaatcggctcattggacaaatagtatcgtccatcacggca
tctcttcgattcgatggagcattaaatgtggatctaacagagtttcaaactaatttagtg
ccttatccccgtattcactttccattggtgacctatgctccagttatttctgctgagaag
gcctatcatgaacaattgtctgtttccgaggtgacgaatgcatgctttgaacctgccaat
cagatggtaaaatgtgacccccgacatggcaagtatatggcttgttgcatgttgtatcgt
ggagatgttgttccaaaggatgtgaatgcggcaattgcaacaatcaaaacgaagagatcc
attcaatttgtggattggtgtcccacaggctttaaagttggaattaactatcaacctccc
actgtggtacccggaggggatttagccaaggttcaaagagctgtttgtatgctctctaat
acaactgcgattgcggaagcttgggctcgtcttgatcataagtttgatcttatgtatgcc
aaaagagcatttgttcattggtatgtgggagagggtatggaagaaggagaattttctgaa
gcaagagaggatttagctgctcttgagaaagattacgaagaagtaggaatggactccctc
gaccccgaggacgaggaaggagaggagtattaa
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